Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  222 bits (566), Expect = 8e-63
 Identities = 122/315 (38%), Positives = 193/315 (61%), Gaps = 2/315 (0%)

Query: 1   MIQSLSIASLLALLLSACSAENPPQALGTLERDRITFSATSNEIIRELPIAEGEHVKVGD 60
           M+ +L  A+LL L L+AC  E+P + LGT+ERDR+T +A   E+I ++ + EG+ V+ G+
Sbjct: 25  MLANLLGAALL-LQLTACGDESP-RVLGTVERDRLTLTAPVGELINQINVVEGQQVQAGE 82

Query: 61  VLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQARVAKARAQHKEAELT 120
           VL++LDS      L Q  A+  +AQA L +   G R EDI  A+A +  A A  KE +  
Sbjct: 83  VLLELDSTAAKARLGQRQAELKQAQAKLEEAVTGARSEDIDKARAALDGANASVKEVQQN 142

Query: 121 LNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIEQAKAELAV 180
             R   L   +++SQ+++DAA +ARD++ A+ A A +    L  G R E +EQA+A +  
Sbjct: 143 FERTQRLFKTKVLSQADLDAALAARDTSLAKQAEAEQSLRLLQNGTRSEQLEQARAAVEA 202

Query: 181 AQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAIVQADRLPYARVYVPAT 240
           A A V  +Q+ L +L+++A R  ++D+LP+ +G+RVA  + +  + A   PY RVY+PAT
Sbjct: 203 AMAGVAQEQKALKDLSLVAARSAVVDTLPWRVGDRVAAGSQLIGLLAIEHPYVRVYLPAT 262

Query: 241 HRAAFVVGQTVTVHVDGIKDQYQGKIRWVANEPSFTPYYALTEKERSRLMYLAEVDLPES 300
                  G  V + VDG      G +R + ++P++TP+YAL E++R+RLMYL ++D+   
Sbjct: 263 WLDRVKAGSQVKILVDGRAQPIAGTVRNIRSQPAYTPFYALNERDRARLMYLTDIDIAPE 322

Query: 301 AMDLPSGLPAQVDLP 315
             DLP+G+  +V LP
Sbjct: 323 GEDLPTGMALEVQLP 337