Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 75/302 (24%), Positives = 136/302 (45%), Gaps = 30/302 (9%)

Query: 30  LERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQ--QAKAQAS 87
           ++ D++  SA     +  L + E + V+ G VL +LD  +   ++ +A A+  Q K   +
Sbjct: 50  VKADKVPVSAQVAGNVDSLYVVENQRVEKGKVLFRLDDAMFKVMVDKASAKLAQVKTDLA 109

Query: 88  LNKLTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDS 147
           + K +  E+  +I +A+ ++A A  + K       R+  L+ K  +S+S+++ AR   D 
Sbjct: 110 VLKASYHEKQAEITLAETKLAFAEKEQK-------RQENLIGKHFVSESQLEDARQNTDI 162

Query: 148 AQAELASAHEEFTKLT---AGARIEDIEQAKAELAVAQANVTLQQQKLD--ELTILATRD 202
           A+  + +  ++  ++     G+    IEQ  + L   +A   L + KLD   + I A   
Sbjct: 163 ARQNIQTLQKDLHRIAESLGGSPDFPIEQHPSYL---EALAQLNEAKLDLSRVEIKAPVS 219

Query: 203 GILDSLPYHLGERVANNAVVAIVQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIKD-Q 261
           G++  LP  LG+ V   A+   + AD   +       T       GQ V +H+D   D  
Sbjct: 220 GVVSQLP-KLGQYVNVGAIALALVADHALWIEANFTETDLTHVKPGQKVNIHIDTFPDNH 278

Query: 262 YQGKIRWVA----NEPSFTPYYALTEK-----ERSRLMYLAEVDLPESAMDLPSGLPAQV 312
           +QG +  ++     E S  P    T       +R  +    +  LPE+   L +GL A V
Sbjct: 279 WQGTVESLSPATGAEFSLIPAQNATGNWVKIAQRVPVRIAIDTALPEA--PLRAGLSAVV 336

Query: 313 DL 314
           D+
Sbjct: 337 DI 338