Pairwise Alignments

Query, 417 a.a., serine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., serine transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  488 bits (1255), Expect = e-142
 Identities = 241/420 (57%), Positives = 320/420 (76%), Gaps = 6/420 (1%)

Query: 3   DSQEVTHFSAARSSKWTQHDTYWLLSLFGTAVGAGILFLPINIGLGGFWPLVLMAVLAFP 62
           ++ + T  S  R   WT+ DT W+LSLFGTAVGAGILFLPIN G+GGFWPLVLMA++  P
Sbjct: 10  ETPQSTQESTTRRLPWTRQDTTWMLSLFGTAVGAGILFLPINAGMGGFWPLVLMAIIIGP 69

Query: 63  MTYLSHRGLARFVLSSRRPNADFTDVVEEHFGQNAGRLISLLYFLSIFPILLIYGVGLTN 122
           MTYL+HRGL+RFV SS  P +D T VVEEHFG  AG+ I+LLYFL+I+PI+LIYGVG+TN
Sbjct: 70  MTYLAHRGLSRFVCSSSIPGSDITQVVEEHFGIGAGKAITLLYFLAIYPIVLIYGVGITN 129

Query: 123 TVDSFLVNQADMVSPPRALLSGALVFGLIAIMLSGEKIMLRAFAIMVYPLAAILALLSLY 182
           TVDSF+VNQ  M SPPR LLSG L+FG++A+M++GE+ ML+   ++VYPL  ILA +S+Y
Sbjct: 130 TVDSFIVNQLGMASPPRFLLSGILIFGMMAVMVAGEQFMLKVTQLLVYPLVGILAFMSVY 189

Query: 183 LIPYWSMPSFD-FPQTSDFLHTVWLAVPVVVFSFSHAAAISSFANIQRRHYGEQADQKSE 241
           LIP W M +    P+T  FL TVWL +PV+VF+F+H+ AIS F+   +R +G  A +K++
Sbjct: 190 LIPEWKMDALQVVPETGAFLGTVWLTIPVLVFAFNHSPAISQFSVSLKRDHGANAARKAD 249

Query: 242 QILRHTSVVLILFVLLFVFSCVLALSPQALQEAKAQNISVLTYLANVTDNPFIATLGPLV 301
            ILR+TS++L+ FV+LFVFSCVL+LSP+ L EAKA+N+ +L+YLANV D+ F++  GP +
Sbjct: 250 VILRNTSMMLVGFVMLFVFSCVLSLSPEQLAEAKAKNLPILSYLANVHDSGFVSYFGPFI 309

Query: 302 AFIAITSSFLGHFLGARESLSGLLTKNL-----GVSLRLAERLTIGFLFVTIWIAAILNP 356
           AFIAI SSF GH++GA E + G++ K L      VS     +  + F+F TIW  AI NP
Sbjct: 310 AFIAIVSSFFGHYMGATEGMKGIIVKQLRSSKKQVSEDKLNKFILVFMFATIWGVAIKNP 369

Query: 357 SILGMMEALSGPVIAMILFIMPMIAVFKVPALREHQKRFSTFFVLLVGLLAVSALLYSLL 416
           SILGM+EAL GPVIA IL++MPM AV+KVPAL+ ++ R S  FV++ GLLA++A+L+ LL
Sbjct: 370 SILGMIEALGGPVIAAILYLMPMYAVYKVPALKAYRHRISNVFVVIAGLLAMTAILFGLL 429