Pairwise Alignments

Query, 417 a.a., serine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., HAAAP family transport protein (RefSeq) from Shewanella sp. ANA-3

 Score =  149 bits (376), Expect = 2e-40
 Identities = 110/411 (26%), Positives = 195/411 (47%), Gaps = 18/411 (4%)

Query: 16  SKWTQHDTYWLLSLFGTAVGAGILFLPINIGLGGFWPLVLMAVLAFPMTYLSHRGLARFV 75
           +++   D  W++   G A+GAGI+FLP+ +GL G W  +L +V+ +P  YL  R L    
Sbjct: 14  TRFDSTDWGWIIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQR-LFINT 72

Query: 76  LSSRRPNADFTDVVEEHFGQNAGRLISLLYFLSIFPILLIYGVGLTNTVDSFLVNQADMV 135
           L+      D+  V+  + G+N G L+  LYF+ +   + +Y   +TN   SFL +     
Sbjct: 73  LAESPECKDYPSVISGYLGKNWGILLGGLYFIMLVIWVFVYSTAITNDSASFLQSFGATT 132

Query: 136 S--PPRALLSGALVFGLIAIMLSGEKIMLRAFAIMVYPLAAILALLSLYLIPYWSMPSF- 192
           S          AL+ GL+A+   GE ++ +    MV     ++A+L L ++  W + +  
Sbjct: 133 SLLSENPFYGLALICGLVALASRGENLLFKISTFMVLTKLGVVAVLGLMMVDKWDINNIG 192

Query: 193 DFPQTSDFLHTVWLAVPVVVFSFSHAAAISSFANIQRRHYGEQADQKSEQILRHTSVVLI 252
             P T D+L    + +P  + S     ++S      R      A  + + +        +
Sbjct: 193 SVPSTGDWLKDAIVMLPFTLTSILFIQSLSPMVISYRSREKSLAVARFKAMRAMNIAFGV 252

Query: 253 LFVLLFVF--SCVLALSPQALQEAKAQNISVLTYLANVTDNPFIATLGPLVAFIAITSSF 310
           LFV++F +  S  LA+  +    A  +NIS L  +A       +  L   +   A+ +++
Sbjct: 253 LFVVVFFYAVSFTLAMGHEQAVRASHENISALAMVAQGMPGQTLKLLSLTLNIFAVMTAY 312

Query: 311 LGHFLGARESLSGLLTKNLGVSLRLAERLT-----IGFLFVTI---WIAAILNPSILGMM 362
            G +LG RE+  G LT N+   +   ER+       G +  TI   W A +LN  +L   
Sbjct: 313 FGVYLGFREACQG-LTMNMLRRVMPEERINKSLVGYGIMIFTILLSWGAIVLNAPVLS-F 370

Query: 363 EALSGPVIAMILFIMPMIAVFKVPALREHQKRFSTFFVLLVG-LLAVSALL 412
            ++  P+  ++  ++P   V++VPAL ++ K  S + +++ G LL +S LL
Sbjct: 371 TSICSPIFGLVGCLIPAYLVYQVPALHKY-KGVSLYIIIVTGLLLCISPLL 420