Pairwise Alignments

Query, 287 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 10/286 (3%)

Query: 7   AELLLVVTTLLAAGGWVFSKQAIQELPPFGFIGLRFIAASLCLLPFCL-----NALKQAS 61
           A L+L+V   +   G+V  +  +  L PF F GLRF+  +L LLP          LK  S
Sbjct: 2   ANLMLLVAAAIWGLGFVAQRLGMDHLEPFAFNGLRFVIGALSLLPLIWVMQRKGRLKGVS 61

Query: 62  RQACFQSMGVGVLLAASLFCWIHAIS----ISDTLGEGAFIMSLSMLFVPLLAWPIFGQR 117
            +   + + +G L    +     +      +  T     FI  L ++ VP+L   +    
Sbjct: 62  DKDILRRVLIGSLACGGILFIAASFQQVGLLHTTAANAGFITGLYIVLVPVLGLLLKHST 121

Query: 118 PIRAFWLSLPVAVVGLFLLAWNGTWQFAANQLWFLAASCCLALHFNFNSRFSSQLPPMLL 177
                W+   VA VGL+ L+    +  +      L  +   A+H      F++++ P++L
Sbjct: 122 GTNT-WVGCAVAAVGLYFLSVGDDFSISYGDGLQLIGAIFWAMHILAVDHFTNRVAPVVL 180

Query: 178 TTLQLFTAGCLGITLSWLTESWPATISPVTWKWFALSVLLATSLRYLMQTMGQKSANPTN 237
              Q          +S + E+         W   A S L++  + Y +Q + QK A+P +
Sbjct: 181 ACGQFLVCALASFGVSLVLETTTVAGVQAAWAALAYSGLVSVGVAYTLQVLAQKHAHPAH 240

Query: 238 AALLMLLEPVWTLVLSVVIYQETMPFNKMLGCGFLLASLLLYRVSL 283
           AA+++ LE V+  +  ++   E++    + GCG +L  +L+ ++ L
Sbjct: 241 AAIILSLETVFAAIGGMMFLGESLSGRALFGCGLMLLGMLISQLPL 286