Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  194 bits (492), Expect = 2e-53
 Identities = 133/446 (29%), Positives = 225/446 (50%), Gaps = 65/446 (14%)

Query: 632  KETEQALRQ---SNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSESQL 688
            +E  QA+ Q   + E+A +A  A++ FLA++SHELRTP+  +LG++++L +   + E   
Sbjct: 242  REQHQAMAQLIKTREEAEKANSAKSEFLAMMSHELRTPMNGVLGMLQLLETTRLTDEQHE 301

Query: 689  LLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIE 748
                A  S E L   +NDILDFS+IE   L+L+   +NLA+ +G   + F+ SA  +++ 
Sbjct: 302  YTALASESTEHLLKVINDILDFSRIERSALELEHIPFNLAELVGSCAQSFQHSAAQRKLG 361

Query: 749  FDVIWSPN-SLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFK-----IDVAPEMLTIV 802
             D++   +   L    D  R  QI+ NL+ NA+KFT+QGRV  +     +D      T  
Sbjct: 362  LDLLVPDDMQALQVQGDPTRIRQILVNLIGNALKFTEQGRVTVQCQWQALDHELLWFTCT 421

Query: 803  VEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQ 862
            V D+G G+    +E +F  F QAD++I+RR+GGTGLG+ I   L E M G +  +SE  Q
Sbjct: 422  VRDSGIGIPAESLERMFDAFQQADNSISRRYGGTGLGLPIARTLAERMGGTLRAQSEEGQ 481

Query: 863  GTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPDL 922
            G+   + +PL             A+S ++P                              
Sbjct: 482  GSVFTLEIPL-------------ALSRQTP------------------------------ 498

Query: 923  LLNRLREVSNLTQAQTEPAHSRLLQG-HVLVADDDAINRLLIKKQLSELGLSATLVSDGL 981
                       T A   P  S   +G +VL+ +D+ +N+ +++  L  LG + ++ +DG 
Sbjct: 499  ----------PTLAPRLPTGSGDGEGRNVLLVEDNPVNQTVVEAMLRSLGFTVSIATDGA 548

Query: 982  QAFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQA 1041
            QA    S     ++ ++ DC +P +DG+  TR+++Q     +  ++  TA   +   E  
Sbjct: 549  QAVR--SAESLIFEAILMDCRLPIIDGYEATRQIRQLPGCGEVPIIALTANALQGDREAC 606

Query: 1042 LQAGMDKVIYKPYTLANLRKVLSRYL 1067
            L AGM+  + KP+   +L+++L R++
Sbjct: 607  LAAGMNDYLAKPFKRNDLQQILQRWV 632