Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  182 bits (463), Expect = 7e-50
 Identities = 152/515 (29%), Positives = 237/515 (46%), Gaps = 83/515 (16%)

Query: 630  ELKETEQALRQSNEQ-------ALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLK 682
            ELK +   L QSNE+       AL   EAR+ FLA +SHE+RTP+  +LG++ +      
Sbjct: 263  ELKASNARLSQSNEELEVARRTALDMAEARSAFLANMSHEIRTPLNGLLGMIALSLDGPL 322

Query: 683  SSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLD---IGLYNLADELGPLLRGFE 739
            ++E Q  L+ A  S + L   +NDILD SK +A QL+L+     L +L ++   LL    
Sbjct: 323  TAEQQQQLSIAHDSGKVLVELLNDILDLSKFDAGQLELERIPFDLGSLVEDTANLLSQNA 382

Query: 740  ASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPEML 799
            A +    +E   +  P        D  R  QIV+NLLSNA+KFT  GRV  K+      +
Sbjct: 383  APS----VELACLIKPQFPAQVLGDPTRVRQIVSNLLSNALKFTRFGRVDVKLSHYEGGV 438

Query: 800  TIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSE 859
             I V DTG G+ Q     +  PF QA + ITR+FGGTGLG+++  NL E M G++ + SE
Sbjct: 439  RIEVCDTGIGIPQEAQARILQPFTQAGAGITRQFGGTGLGLALTYNLCEAMQGRLTISSE 498

Query: 860  FEQGTQIQVNLP----LVTQTCDEFRGQVVAMSYRSPYMLWAKALGM-----RVEENEEW 910
               G+Q   +LP    L     +  RG VVA++  S  +  A+ LGM      ++  +  
Sbjct: 499  AGFGSQFCADLPLPCHLPATPVEPLRGNVVAITASSSGL--AELLGMLLPGWGLDYVQRS 556

Query: 911  VEQSGHNIYPDLLLN-------------------------------------RLREVSNL 933
            ++     + PD+L+                                       +++   L
Sbjct: 557  IDDGLLGLKPDMLITDCPECLFNLRPTFDAPILLVTAYGSFMPSEEAAALAPLIQQARPL 616

Query: 934  TQAQTEPAHSRLLQGHVLVADD-------------------DAINRLLIKKQLSELGLSA 974
             +        R +Q    V DD                   + +N+L+ K  L +LG   
Sbjct: 617  ARLALYQILRRAMQSEATVIDDAQIETLAPSRRGRVLLVEDNPVNQLVAKGMLVKLGCEV 676

Query: 975  TLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDS 1034
            T+ + G +A  +L Q    +DL++ DC+MP +DG+  +R+++Q        +V  TA   
Sbjct: 677  TVAAHGAEALSQLEQ--RVFDLVLMDCNMPVMDGYEASRQIRQSGRWSDLPIVALTANAM 734

Query: 1035 RLAAEQALQAGMDKVIYKPYTLANLRKVLSRYLTT 1069
                E+   AGM+  + KP+    L  VL +++ T
Sbjct: 735  PEERERCRAAGMNDYLSKPFRREELAAVLDQWVPT 769