Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1187 a.a., Hybrid sensory histidine kinase in two-component regulatory system with EvgA from Pseudomonas fluorescens FW300-N2E2

 Score =  240 bits (612), Expect = 6e-67
 Identities = 291/1250 (23%), Positives = 530/1250 (42%), Gaps = 183/1250 (14%)

Query: 7    LDPNEQAYVEQKSTVTIAVLKEIWMPYWGGT-GQEPIGIEHDFASGIAKELGINIEYKGF 65
            LD   +A+++ +  + +      + P+   T G++  G+  D+A  IAK + + I    F
Sbjct: 27   LDDVHRAWLQDRQALVLGTSAPDYPPFDLSTSGRDYEGLTADYADIIAKAIDLPITVLRF 86

Query: 66   DTIEALLNAVSTGKADMAIGFGQTLAREGKFLFSKPLYENVRVIWLRDKAMEEKPFASLK 125
             + EA + A+  G+ DM        AR    + S P   +  V+  R           L+
Sbjct: 87   GSREAAMAALKDGQIDMLGTANGFEARNPDIVLSTPYAVDQPVLVTRTNESRSLT-DDLE 145

Query: 126  WVCIQGTSYCEILK--DRGYPNIIMAR--NYSSSVEMIRQGIADATV-----TNYVSLNH 176
             + +    +   L+  ++ YP  ++    +Y +++  +  G AD  +     T+Y+    
Sbjct: 146  GLRLSMVYHYLPLREIEKLYPKALITTYPSYQNAINAVAFGQADVFLGDTLSTHYMINKG 205

Query: 177  YLSQKRLALGKVIFDPDLGVQTNRILINNNEPLLLSAINKVID----ADKQGLTENKLNS 232
            YLS  R+A          G    R     ++  LL  IN  +     A++  +++     
Sbjct: 206  YLSNIRMASFGKHESHGFGFAVRR-----SDTRLLEVINATLSQVSIAEQAAISKRWSAG 260

Query: 233  ADVYFLNDQANLNILRNENV--NPVVRYTIQDDLFPMSYWDEKEKKYKGYVHDLLERIST 290
            +D+Y  + +  L       +  +PVVR  + +   P +++D  +  ++G   DLLE I  
Sbjct: 261  SDLYLTDHRIQLTDREQRWLAGHPVVRVVVNETSAPFTFFD-ADGDFRGISADLLELIRL 319

Query: 291  KSILKF---------EFVPAYGRDVEDMLRHGKVDLIPS--------FNMTYVDDRYFIH 333
            ++ L+          E + A   D  DM+      L+PS        F+  YVD  + + 
Sbjct: 320  RTGLRLDIQRRQNDSEMIAAVLNDQADMI----AALLPSSERQLQLKFSRPYVDSSFVLL 375

Query: 334  TGRYTDIQFGYIETTRPYTTPITGILDRTGKFNAYIAVQKNLSDVKVYRSMYDLEQALEK 393
            T + +D             TP T  LD+ G  +A +A+ K    +   RS Y   Q +E 
Sbjct: 376  TRKQSD-------------TPTT--LDQLG--HASLAIAKGNPVIGWLRSQYPNLQIIET 418

Query: 394  GD-------ITHGLLNKVLINQMLLD------GHQDAFKLSPLTEGQDLRADMTMLVRKD 440
                     + HG ++  + +Q++ +        +D  ++S     Q  +A   +   K+
Sbjct: 419  DGPLRAVEMLAHGQVDGSVNSQVMANYFISSYAWRDRLQISSTVGTQ--QAMFALATAKN 476

Query: 441  ARGLQNMLQKVLATFSQQEIDEIKGAYDRVTVYFGYDKQKVLIYALIILCALLSIGLILT 500
            A  L  +L K L +    E+  I    +R   Y    +     Y  + L  ++ +GL+L 
Sbjct: 477  ATELNAILDKALTSIDPDELGVIN---NRWRGYVSPSEHTWRTYNRLFLQVVVGVGLLLL 533

Query: 501  LSL---SRLRGKLRSSEQVAKLSTEQLRWLTELLDAIPSMIFISDAKGEVVLTNAAYRKI 557
             SL   + ++ ++R  ++      +QL ++  LL+  P  I++ D  G +   N +Y + 
Sbjct: 534  FSLAWNAYMQRQIRQRQRAELALNDQLEFMHSLLNGTPHPIYVRDRNGILQSCNDSYLQT 593

Query: 558  YHTCCE----KGCVQPQPECSFLALPDQHEAEFSIIIQAPKSNCSIGEHYFHVTRRAIS- 612
            +    E    K  +      +F A   +++A++  ++   +    I +   H+  R ++ 
Sbjct: 594  FDVKREDVIGKSLMPGSMSNAFEA--QEYQADYQRVM--AEGTALIVDRPLHIGDRQLTI 649

Query: 613  --------HPINQRKYYLTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELR 664
                    +   + +  +  + DI+E ++  + LR S ++A  A  A++ FLA +SHE+R
Sbjct: 650  YHWILPYRNSAAEVQGIIGGWIDISERRQLFEELRASKQRADDANRAKSTFLATMSHEIR 709

Query: 665  TPIAAMLGLMEI-LASRLKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIG 723
            TP+ A++G++E+ L    K    +  +  A  SA  +   + DILD ++IE+  L L   
Sbjct: 710  TPMNAVIGMLELALKQADKGRVDRSTIEVAYESASGMLELIGDILDIARIESGHLSLAPE 769

Query: 724  LYNLADELGPLLRGFEASAQLK----EIEFDVI-WSPNSLLLANFDALRFNQIVTNLLSN 778
              NL   L  ++R FE  A+ K     ++FD    SP+ L+    D LRF Q+++NL+SN
Sbjct: 770  RVNLRALLQSVIRVFEGVARQKNLALSLQFDAAKGSPDVLM----DPLRFKQVLSNLISN 825

Query: 779  AIKFTDQGRVVFKIDVAPE------MLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRR 832
            A+KFT+QG+VV K+ ++P        + + V D+G G+    ++ LF PFAQ D+T    
Sbjct: 826  ALKFTEQGQVVIKVRLSPTDRDDVLQMHLEVNDSGIGIAPADLQRLFEPFAQVDNTSRMA 885

Query: 833  FGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSP 892
              G GLG+ I  NL  +M G + + S+   GTQ+QV L L           +     R P
Sbjct: 886  RNGAGLGLVISRNLCRMMGGSLHMNSQPGTGTQVQVCLQLTV---------LATAPVRPP 936

Query: 893  YMLWAKALGMRVEENEEWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLV 952
                                       P+ ++   +   N+      PA           
Sbjct: 937  ---------------------------PEPVIETAQAPLNVLIVDDHPA----------- 958

Query: 953  ADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALT 1012
                  NRLL+ +QL  LG    +  DG    E   ++   +DL+I DC+MP + G+ L 
Sbjct: 959  ------NRLLMSQQLEYLGHHYQVAHDGAHGLEVWQEN--HFDLVIADCNMPIMSGYELA 1010

Query: 1013 RKVKQEISLFKG---AVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYLTT 1069
            R ++++ S  +     ++G TA       ++   AGMD  ++KP +L+ L + +      
Sbjct: 1011 RSIRRDESEQQRPPCTLLGFTANAQPEEKQRCQDAGMDDCLFKPISLSALSQWIKAVKPV 1070

Query: 1070 QWVALPEQSWLDAYQEEEREEMAMVVAESLAQ---------DIALLNQPDCDVKALAHRI 1120
               A      L A    +      ++AE L+          DIA        +  +AH+I
Sbjct: 1071 SCPAAFSIQSLQALTGGDPSSNRRLLAELLSSSRSDRQELLDIAHSANRSA-LAEIAHKI 1129

Query: 1121 KGAAGSLQLQRLADLAKTVEKQNDPQQLVADKQQLINAMHEVVEQAQQWL 1170
            KG A  +Q   L    + +E      Q        I+A+   + + ++ L
Sbjct: 1130 KGVARIVQATSLIQRCEALEHACHQAQAPRRISDCIDALDRAMSELERAL 1179