Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1239 a.a., sensor histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score =  164 bits (414), Expect = 5e-44
 Identities = 137/436 (31%), Positives = 211/436 (48%), Gaps = 23/436 (5%)

Query: 629  TELKETEQA-LRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEIL-ASRLKSSES 686
            TE+ E +   L Q+  QA  A +A++ F+A VSHELRTP+  +L  +E L A+    ++ 
Sbjct: 529  TEVLEAQAIELIQARNQAETANQAKSDFVATVSHELRTPLTLILAPLEQLRAATTPPADW 588

Query: 687  QLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKE 746
             + +  A  +A RL   VNDILDFSK EA + +L     +L   +G L       A+ K 
Sbjct: 589  HVQVDRAQRNALRLMNRVNDILDFSKAEAGKFELCPMPVDLNKTVGVLAEDAAMVAEGKG 648

Query: 747  IEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVA--PEMLTIVVE 804
                    P +L     D   F +I+ NL+SNAIKFT  G  V     A   E   + V+
Sbjct: 649  CTLTCSIDP-ALGTVFLDPRHFEKILLNLVSNAIKFTPAGGTVHVAVAAIDGERFELAVQ 707

Query: 805  DTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGT 864
            D+G G+   ++  LF  F+Q D++ TR + GTG+G+++V +L++LM G++ V SE  +G+
Sbjct: 708  DSGIGIAPDKLPLLFQRFSQIDNSATRHYSGTGIGLALVKDLVKLMGGEVGVNSEPGRGS 767

Query: 865  QIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPDLLL 924
               V LPL  +  D   G+   M  RS     + +     E+     +   H        
Sbjct: 768  CFFVRLPLGAEQ-DTVPGETSHMHERS-----SLSTASTTEQRHLRFDDGRHG-----SR 816

Query: 925  NRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAF 984
            N    + +  +  +E A    L+  VLV DD     L   ++L     S    +DG QA+
Sbjct: 817  NDRAPMEDAVEQHSEHA----LRSKVLVVDDSP-EMLSYLRELLRDDYSVATATDGEQAW 871

Query: 985  EKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQALQA 1044
              L + P   D++++D  MP LDGF LT ++K         V+  TA     A    L++
Sbjct: 872  ALLQRRP--IDVVVSDVMMPKLDGFGLTARIKASAGFAHLPVILVTARGGSEACVSGLES 929

Query: 1045 GMDKVIYKPYTLANLR 1060
            G D  I KP++   L+
Sbjct: 930  GADDYIAKPFSPLELK 945