Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 967 a.a., Hybrid sensory histidine kinase in two-component regulatory system with EvgA from Pseudomonas fluorescens FW300-N1B4

 Score =  201 bits (512), Expect = 2e-55
 Identities = 220/933 (23%), Positives = 413/933 (44%), Gaps = 97/933 (10%)

Query: 7   LDPNEQAYVEQKSTVTIAVLKEIWMPY-WGGTGQEPIGIEHDFASGIAKELGINIEYKGF 65
           LD +++ + + K  + +      + P+    +G +  G   D+A  + K +G+ ++ + F
Sbjct: 47  LDTSQRQWAKDKRELILGTSAPDYPPFDLTLSGHDYEGFTADYAGILGKAIGLPVKVQRF 106

Query: 66  DTIEALLNAVSTGKADMAIGFGQTLAREGKFLFSKPLYENVRVIWLRDKAMEEKPFASLK 125
            +  A + A+  G+ DM        A       S P   +  V+  R+            
Sbjct: 107 ASRGAAIEALEKGQVDMLGTANGFEADNADIALSTPYAVDQPVLVTREGETRSLTDGLAG 166

Query: 126 WVCIQGTSYCEILKDRG-YPNIIMAR--NYSSSVEMIRQGIADATV-----TNYVSLNHY 177
                   Y  + + R  YP  I+    +Y +++  +    AD  +     T+Y+    Y
Sbjct: 167 MRLSMVYHYLPLDEVRALYPKAIITSYPSYQNAINAVAFDQADVFLGDTISTHYIINKGY 226

Query: 178 LSQKRLA-LGKVIFDPDLGVQTNRILINNNEPLLLSAINKVIDADKQGLTEN--KLNSAD 234
           L+  R+A  GK               +  + P LL+ IN V+ A      EN  K  SA 
Sbjct: 227 LNNIRMANFGKH------EAHGFSFAVQKDNPDLLAIINAVLKAIPTSERENIAKRWSAG 280

Query: 235 VYFLNDQANLNILRNEN----VNPVVRYTIQDDLFPMSYWDEKEKKYKGYVHDLLERIST 290
              L     L +   E      +PVVR  + +   P++++D  +  ++G   DLLE I  
Sbjct: 281 SDILLTDHKLQLSHREERWLAQHPVVRVVVNEAFAPLTFFDS-DGNFRGVTADLLELIRL 339

Query: 291 KSILKFEFVPAYGRD--VEDMLRHGKVDLIP------------SFNMTYVDDRYFIHTGR 336
           ++ L+FE   +   D  +E +  H + DLI             SF+  Y+++ + + T +
Sbjct: 340 RTGLRFEIQRSRSDDEMIEQIANH-QADLIAALLPSVQRETTLSFSRPYLENSFVLLTRK 398

Query: 337 YTDIQFGYIETTRPYTTPITGILDRTGKFNAYIAVQKNLSDVKVYRSMYDLEQALEKGDI 396
             D             T +T + D+       +A+ +    V   RS +     +E  D 
Sbjct: 399 AADSP-----------TNLTQLQDKR------LAIAQGNPLVDYLRSEFPRINLVETPDT 441

Query: 397 -----------THGLLNKVLINQMLLDGHQDAFKLSPLTEGQDLRADMTMLVRKDARGLQ 445
                        G +N ++I    +        L   T     +A  ++   +DA+ L 
Sbjct: 442 FSAVELLAEGQAEGAVNSLVIANYFISSRIFEQTLQISTTIGTRQAAFSLATGRDAKELN 501

Query: 446 NMLQKVLATFSQQEIDEIKGAYDRVTVYFGYDKQKVLIYALIILCALLSIGLILTLSLS- 504
            +L K L + + +E+  I    +R   Y    +     Y  +    ++  G++L +S++ 
Sbjct: 502 AILDKALLSIAPEELGIIN---NRWRGYSAASQSTWRNYHRVFYQIVIGAGVLLLISVAW 558

Query: 505 --RLRGKLRSSEQVAKLSTEQLRWLTELLDAIPSMIFISDAKGEVVLTNAAYRKIYHTCC 562
              +R +++  +   +   +QL ++  L++  P  I++ D +G +   N +Y + +    
Sbjct: 559 NAYMRRQIKQRQAAERALNDQLEFMRSLVNGTPHPIYVRDRQGLLQSCNDSYLEAFRAKR 618

Query: 563 E----KGCVQPQPECSFLALPDQHEAEFSIIIQAPKSNCSIGEHYFHVTRRAIS--HPI- 615
           E    KG +       F A   +++A++  ++   +    I +   H+  R ++  H I 
Sbjct: 619 EDIIGKGVIPGTLGNLFEAR--EYQADYQRVMA--EGTPLILDRPLHIEDRKLTIYHWIL 674

Query: 616 ------NQRKYYLTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAA 669
                    +  +  + DI+E ++    LR + EQA  A  A++ FLA +SHE+RTP+ A
Sbjct: 675 PYRDSSGDVQGIIGGWIDISERRQLFDELRAAKEQADAANRAKSTFLATMSHEIRTPMNA 734

Query: 670 MLGLMEILASRLKSSE-SQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLA 728
           ++G++E+   R+  S   +  +  A  SA+ L   + DILD ++IE+ +L L     NLA
Sbjct: 735 IIGMLELTLKRIDHSHPDRPAIDVAYHSAKDLLELIGDILDIARIESGRLNLSPERVNLA 794

Query: 729 DELGPLLRGFEASAQLKEIEFDVIWSPNSLLL-ANFDALRFNQIVTNLLSNAIKFTDQGR 787
           + +  ++R F+  A+ K +   + +SP         D +RF Q+++NL+SNAIKFT QG+
Sbjct: 795 ETVASVVRIFDGLARQKNLGLQLEFSPAKPTTDVVLDPMRFKQVLSNLISNAIKFTQQGQ 854

Query: 788 VVFKIDVAPE------MLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMS 841
           V   +++          L ++VED+G G+++   + LF PF QAD++     GG GLG+ 
Sbjct: 855 VRISVELQSTDEPDRAQLQLLVEDSGAGISEQDQQRLFEPFVQADNSGQLARGGAGLGLV 914

Query: 842 IVANLIELMNGKIEVKSEFEQGTQIQVNLPLVT 874
           I  NL E+M G +++ S+   GTQ++++L L T
Sbjct: 915 ISRNLCEMMGGSLQLNSQSGVGTQVRISLNLAT 947