Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1206 a.a., multi-sensor hybrid histidine kinase from Pseudomonas syringae pv. syringae B728a

 Score =  224 bits (572), Expect = 3e-62
 Identities = 290/1207 (24%), Positives = 532/1207 (44%), Gaps = 147/1207 (12%)

Query: 7    LDPNEQAYVEQKSTVTIAVLKEIWMPY-WGGTGQEPIGIEHDFASGIAKELGINIEYKGF 65
            LD N+  +V  +  + +      + P+    +G +  GI  D+A  I+  L + I  + F
Sbjct: 46   LDNNQWQWVRGQRELILGTSNPDYPPFDITMSGNDYEGITADYAGIISDALDLPIRVQRF 105

Query: 66   DTIEALLNAVSTGKADMAIGFGQTLAREGKFLFSKPLYENVRVIWLRDKAMEEKPF-ASL 124
            +T +A + A+  G+ D+        A +     S+P   +  V+  R    + +P    L
Sbjct: 106  ETRDAAIKALGAGQIDLLGTANGFEAVDRTIRLSQPYSVDQPVLVTR--VGDNRPLNEGL 163

Query: 125  KWVCIQGTSY----CEILKDRGYPNIIMAR--NYSSSVEMIRQGIADATV-----TNYVS 173
            K + +    +     E+  +  YP   +    ++ +++  +    AD  +     T Y+ 
Sbjct: 164  KGMRLSMVYHYLPPAEV--EASYPGATLKTYPSFQNAINAVAFNQADVFLGDTISTQYII 221

Query: 174  LNHYLSQKRLA-LGKVIFDPDLGVQTNRILINNNEPLLLSAIN---KVIDADKQGLTENK 229
               YL+  +++  GK   +P+         +++  P LL  IN   K I  D++     +
Sbjct: 222  NKGYLNNVQMSNFGK--HEPN----GFSFAVSSENPQLLGIINQTLKAIPVDERVNISRR 275

Query: 230  LNSADVYFLNDQANLNILRNEN---VNPVVRYTIQDDLFPMSYWDEKEKKYKGYVHDLLE 286
             ++     L DQ      R E     +P VR  + +   P++++D K   ++G   DLLE
Sbjct: 276  WSTGSDLMLTDQKLQLTQREERWIAQHPTVRVVVNEAYAPLTFFDAKGN-FRGITADLLE 334

Query: 287  RISTKSILKFEFVPAYG-RDVEDMLRHGKVDLIPSFNMTYVDDRYFIHTGRYTDIQFGYI 345
             +  ++ L+F+   +    D+ + +  G+ D+I +   +   +     T  Y D  F  +
Sbjct: 335  LVRLRTGLRFDVKRSPSLTDMLNQVSEGQADMIGALVSSDAREDRLSFTRPYIDNSFVLV 394

Query: 346  ETTRPYTTPITGILDRTGKFNAYIAVQKNLSDV-KVYRSMYDLE-----QALEK---GDI 396
                P        +D  GK  A       L  + + Y  +  LE     QAL+    G  
Sbjct: 395  TRKEPGAPSYLEQMD--GKRLAITQGSPVLDWLSRKYPRVVPLEIDNPFQALDMLSLGRA 452

Query: 397  THGLLNKVLINQMLLDGHQDAFKLSPLTEGQDLRADMTMLVRKDARGLQNMLQKVLATFS 456
               +++ +  +  L  G  +       T G+D  A ++M   ++A  L ++L K LA+ +
Sbjct: 453  EGAVISLLSADYFLSSGIFEERLQMTATVGED-PALISMATSRNAIELSSILDKALASIA 511

Query: 457  QQEIDEIKGAYDRVTV----YFGYDKQKVLIYALIILCALLSIGLILTLSLSRLRGKLRS 512
             Q++  I   +   T     +  Y++   LIY +++   LL +GL+   +   +R ++R 
Sbjct: 512  PQDLAAINNRWRVYTPSRANWHDYER---LIYQIVVGAGLLLLGLLAWNAW--MRRQIRQ 566

Query: 513  SEQVAKLSTEQLRWLTELLDAIPSMIFISDAKGEVVLTNAAYRKIYHTCCE--------K 564
             E   +   +Q  ++  L++  P  I++ D +G + + N +Y +++    E        +
Sbjct: 567  REAAERALGDQFEFMRALVEGTPHPIYVRDREGMLRMCNDSYLRVFSAQREDIIGKSATE 626

Query: 565  GCVQPQPECSFLALPDQH--EAEFSIIIQAPKSNCSIGEHYFHVTRRAISH--PINQRKY 620
            G +    E    A   Q    +  ++I+  P     IG+    +    +     + + + 
Sbjct: 627  GVLGNAFEAREYAADYQRVMASNTALILDRP---LRIGDRQLTIYHWILPFRDSLGEVQG 683

Query: 621  YLTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASR 680
             +  + DI+E ++  + L+ + EQA  A  A++ FLA +SHE+RTP+ A++G++E+   R
Sbjct: 684  IIGGWIDISERRQLIEDLQAAKEQADAASRAKSTFLATMSHEIRTPMNAVIGMLELALKR 743

Query: 681  LKSSE-SQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFE 739
                E  +  +  A SSA  L   + DILD ++IE+ +L L+    NL   +  +LR F+
Sbjct: 744  ADHGELDRSAIEVAYSSANDLLDLIGDILDIARIESGRLSLNPERANLRRLVEAVLRVFD 803

Query: 740  ASAQLKEIEFDVIWSPNSLLLAN--FDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVA-- 795
              A+ K++E  ++   +S + A+   D LRF QI++NL+SNAIKFT  GR+   +  A  
Sbjct: 804  GLARQKDLE--LVLELDSRINADVLIDPLRFKQILSNLVSNAIKFTPMGRIKVVLLAAES 861

Query: 796  --PEMLT--IVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMN 851
              P++L   I V+D+G G++    + LF PFAQAD+T      G GLG+ I  +L  +M 
Sbjct: 862  PDPQLLHLHITVQDSGIGISVEDQQRLFEPFAQADNTGQMARTGAGLGLVICRSLCMMMG 921

Query: 852  GKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWV 911
            G + + S    GT+I +N  LV  T +   GQ V                         V
Sbjct: 922  GNLSLDSTPGHGTRISMN--LVLTTLEPLTGQPV-------------------------V 954

Query: 912  EQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELG 971
             Q    ++  L +                         ++V D  A NRLL+ +QL  LG
Sbjct: 955  AQPAAVVHQTLRI-------------------------LIVDDHPA-NRLLLCQQLRFLG 988

Query: 972  LSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQE---ISLFKGAVVG 1028
                +  +G Q  ++     + +DL++ DC+MP ++G+ +T  ++++       +  V G
Sbjct: 989  HHCEMAENGAQGLDRWKN--DAFDLVVADCNMPIMNGYDMTAAIREQERACERQRCPVWG 1046

Query: 1029 CTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYLTTQWV-----ALPEQSWLDAY 1083
             TA       E+   AGMD  ++KP +L+ L + L+             +L   S L   
Sbjct: 1047 FTANAQPDEIERCRAAGMDDCLFKPISLSMLSERLTAIAPLAPARALPFSLDSVSNLTGD 1106

Query: 1084 QEEEREEMAMVVAESLAQDIALLNQ--PDCD---VKALAHRIKGAAGSLQLQRLADLAKT 1138
            + E  E +   +  S  +D  LL +  P+ +    + LAHRIKGAA  +   R+ D    
Sbjct: 1107 RPEMVERLLAQLLHSNHEDRLLLARLMPENNRQKTRDLAHRIKGAARIITASRVVDACDA 1166

Query: 1139 VEKQNDP 1145
            +E   +P
Sbjct: 1167 LELACEP 1173