Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  181 bits (459), Expect = 2e-49
 Identities = 132/447 (29%), Positives = 214/447 (47%), Gaps = 64/447 (14%)

Query: 630  ELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSESQLL 689
            E + +   L Q+ E+A QA  A++ FLA++SHELRTP+  +LG++++L +   + E    
Sbjct: 245  EQQRSVAQLIQTREEAEQANRAKSDFLAMMSHELRTPMNGVLGMLQLLETTHMTHEQSEY 304

Query: 690  LTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIEF 749
             T A  S E L   +NDILDFS+IE   LQ++   +NLA+ +      F  SA  + +  
Sbjct: 305  ATLATESTEHLLRVINDILDFSRIERDALQMEGIPFNLAELVSASTHAFNHSAAQRNLLL 364

Query: 750  DVIWSPN-SLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPEML-------TI 801
            ++   P    +    D  R  QI+ NL+ NA+KFT++G+V   +D    ML       T 
Sbjct: 365  ELHIQPGLETMNVIGDPTRIRQILVNLIGNALKFTERGKVC--VDARWAMLDDERLHFTC 422

Query: 802  VVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFE 861
             V+D+G G+   ++ES+F  F QADS+I+RR+GGTGLG+ I   L E M G +  +S+  
Sbjct: 423  AVQDSGIGIDAERLESMFDAFKQADSSISRRYGGTGLGLPIARTLAERMGGTLYAESKEG 482

Query: 862  QGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPD 921
             G+   + +PL                 R   +  AK L +      E            
Sbjct: 483  SGSLFTLQIPLPLS--------------RDASVAIAKPLSILDAHGRE------------ 516

Query: 922  LLLNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGL 981
                      ++   +  P +  ++Q                   L  LG    +  DG 
Sbjct: 517  ---------RSILLVEDNPVNRTVVQA-----------------MLRNLGCEVDIAVDGA 550

Query: 982  QAFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQA 1041
            +A  K       + L++ DC +P +DG+  TR+++Q   L +  ++  TA   +   +  
Sbjct: 551  EAVMK--ARAGNHALILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDAC 608

Query: 1042 LQAGMDKVIYKPYTLANLRKVLSRYLT 1068
            LQAGMD  + KP+  A+L++VL R+L+
Sbjct: 609  LQAGMDDYLPKPFKHADLQQVLQRWLS 635