Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1261 a.a., response regulator from Synechocystis sp000284455 PCC 6803

 Score =  154 bits (389), Expect = 4e-41
 Identities = 133/457 (29%), Positives = 214/457 (46%), Gaps = 81/457 (17%)

Query: 627  DITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSES 686
            DIT +K  E  ++++ E A +A   +  FLA +SHE+RTP+ A++G+  +      +   
Sbjct: 502  DITPIKAAEAEMKRAKELAEEASRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQ 561

Query: 687  QLLLTNAISSAERLKLHVNDILDFSKIEAQQL---QLDIGLYNLADELGPLLRGFEASAQ 743
            +  L     S + L   +NDILDFSKIEA +L    +D  L  + D +  L+   +A+ +
Sbjct: 562  REYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISE-KATNK 620

Query: 744  LKEIEFDVIWSPNSLLLANF--DALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPE---- 797
              E+ FD+    +  L  +F  D LR  QI+ N  +NA+KFT+QG +   + +       
Sbjct: 621  GLELLFDI----DRNLPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQEYRDQD 676

Query: 798  -MLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEV 856
             +L + V+DTG G+    I +LF  F QADS+ TR FGGTGLG++I   + ELM G++ V
Sbjct: 677  VVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGV 736

Query: 857  KSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGH 916
            +SE+ QG+                               WAK    +             
Sbjct: 737  ESEYGQGS-----------------------------TFWAKVCLQK------------S 755

Query: 917  NIYPDLLLNRLREVSNLTQAQTEPAHSRLLQG-HVLVADDDAINRLLIKKQLSELGLSAT 975
            N+ P  L+                  S+ L+G  VLV DD+   RL++K  L ++     
Sbjct: 756  NVIPHRLV-----------------LSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVE 798

Query: 976  LVSDGLQAFEKLSQ-----HPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCT 1030
             V  G +A   L++     HP  + ++  D  MP++DG  + R++K      + ++   T
Sbjct: 799  TVESGPEALNFLAEADRENHP--HSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVT 856

Query: 1031 AEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYL 1067
            A        +A   G+D V+ KP + + L   L+R L
Sbjct: 857  AYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARVL 893



 Score = 60.1 bits (144), Expect = 1e-12
 Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 34/254 (13%)

Query: 920  PDLLLNRLREVSNLTQAQTEPAHSRLLQG-HVLVADDDAINRLLIKKQLSELGLSATLVS 978
            P  L   +R+ S +          R ++G  +L+ +D+ IN+ +  + L ++G +  + +
Sbjct: 896  PTALAQEMRQSSGIGAEDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAA 955

Query: 979  DGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAA 1038
            +GL A E+L+ +   Y L++ D  MP +DG   T  ++Q     +  +V  TA   +   
Sbjct: 956  NGLIALERLNNNA--YALVLMDMQMPEMDGIEATIAIRQNPRYAQLPIVAMTANVMQGDR 1013

Query: 1039 EQALQAGMDKVIYKPYTLANLRKVLSRYLTTQWVALPEQSWLDAYQEEERE--------- 1089
            E+ LQAGM+  + KP     L   L  ++       PE     A    + E         
Sbjct: 1014 ERCLQAGMNDHLGKPIEPEELWNKLLHWIPVDSPLAPETIEESAINTSDPEISIPHIPGL 1073

Query: 1090 ---------------------EMAMVVAESLAQDIALLNQPDCD-VKALAHRIKGAAGSL 1127
                                 +     +  L +    L + D    + LAH +KG AG++
Sbjct: 1074 NSDDGLRRVLGKKSLYLKMLHKFVASQSSFLPEITQALGEKDYGFAERLAHTLKGVAGNI 1133

Query: 1128 QLQRLADLAKTVEK 1141
              Q L   A  +EK
Sbjct: 1134 GAQELQQEAAELEK 1147