Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1141 a.a., putative integral membrane sensor protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  187 bits (475), Expect = 4e-51
 Identities = 169/572 (29%), Positives = 267/572 (46%), Gaps = 93/572 (16%)

Query: 627  DITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSES 686
            DITE ++ EQ L ++ + A  A  AR  FLA +SHE+RTP+ A++G  +IL       E 
Sbjct: 511  DITERRQMEQELLEAKDIAEAAATARAAFLANMSHEIRTPMNAIIGFSDILLESQFEPEK 570

Query: 687  QLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKE 746
               L     +A+ L   +ND+LD +K++  +L+L++  ++L  EL  ++      A+ K 
Sbjct: 571  HRHLKTINHAAKSLLHLLNDVLDSAKLDKGKLELEVRDFSLVQELDEVISTLWLQARRKG 630

Query: 747  IEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAP---EMLTIVV 803
            ++  +  SP  L        R  Q++TNL+SNA+KFT++G+V  ++ V P     +  VV
Sbjct: 631  LQLTMEVSPKLLPCYAGSPERIRQVLTNLVSNAVKFTEKGQV--RLTVNPGQGNHVDFVV 688

Query: 804  EDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQG 863
            EDTG GM+  Q++ +F PF QAD++++RRFGGTGLG +I   L+ELM G I   SE  +G
Sbjct: 689  EDTGIGMSPEQLDKIFDPFTQADASMSRRFGGTGLGTTISKQLVELMGGHISAGSELGKG 748

Query: 864  TQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPDLL 923
            ++   +LPL    CDE                               V    H   P + 
Sbjct: 749  SRFCFSLPLNPGVCDEL------------------------------VPLENHVSLPPMT 778

Query: 924  LNRLREVSNLTQAQTEPAHSRLL--QGHVLVADDDAINRLLIKKQLSELGLSATLVSDGL 981
            +  + ++     AQ     S LL   GH ++ + D                       G 
Sbjct: 779  VLVVDDI-----AQNLELLSTLLGRDGHRVITESD-----------------------GQ 810

Query: 982  QAFEKLSQHPEQYDLLITDCHMPHLDGFALT---RKVKQEISLFKGAVVGCTA---EDSR 1035
            QA  +++  P   DL++ D  MP +DG + +   R  +Q   L    ++  TA   ED R
Sbjct: 811  QALARMASEP-AIDLVLMDVQMPVMDGLSASRARRDKEQREGLTHLPIIALTASVLEDDR 869

Query: 1036 LAAEQALQAGM-DKVIYKPYTLANLRKVLSRYLTTQWVALP---------EQSWLDAY-- 1083
             AA QA   G  +K I  P   A + +VL         A P         E+  +D +  
Sbjct: 870  TAARQAGMDGFANKPIDYPLLCAEIARVLGLKHAPIEAATPQSQPGKLIDEKKGMDLWGS 929

Query: 1084 QEEEREEMAMVVAESLAQDIALLNQ-PDCD---VKALAHRIKGAAGSLQLQRLADLAKTV 1139
            ++    ++A+ V E   Q   L +Q   CD   +K  AH +KG + +L L RL+   + +
Sbjct: 930  RDSYYRQLALFVEEQAEQFERLSSQCHACDWPALKQTAHGLKGVSANLSLTRLSRNLEKL 989

Query: 1140 EK--QNDPQQ---LVADKQQLINAMHEVVEQA 1166
            E    + P+Q    VA  QQ+  A+   V+ +
Sbjct: 990  ESLLASHPEQCALFVAPIQQVFAAVKAEVQSS 1021