Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 924 a.a., Multi-sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  184 bits (467), Expect = 3e-50
 Identities = 171/570 (30%), Positives = 253/570 (44%), Gaps = 103/570 (18%)

Query: 623  TLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLK 682
            TL   I  L E     R   +   Q  +A + FLAV+SHE+RTP+  +LG+ ++L +   
Sbjct: 374  TLLTQIEPLLEDAPVFRA--DVVDQMTQAASQFLAVMSHEIRTPMTGILGMGDLLLTSGL 431

Query: 683  SSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYN----LADELGPLL--- 735
            + E +      + SA  L   ++D+LDFSKIEA QL+L++  ++    L D +G  L   
Sbjct: 432  NEEQEKYGRTLMRSARTLLGLLDDVLDFSKIEAGQLELEVVDFSPVEVLQDVIGLFLPKA 491

Query: 736  --RGFEASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKID 793
              RG   S++L E        P  +L    D  R  Q++ NL+ NA+KFT +G V  ++D
Sbjct: 492  SERGLVLSSRLPE-------GPPPILRG--DPTRLRQVLFNLVGNAVKFTARGGVEVRMD 542

Query: 794  VAPEM-----LTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIE 848
            V   +     LT+ + D+G GM   Q   LF PF QAD + TRRFGGTGLG++I   L+E
Sbjct: 543  VGEAVGDQIPLTLSIIDSGVGMDARQRARLFNPFTQADVSTTRRFGGTGLGLTICKRLVE 602

Query: 849  LMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENE 908
            +M G IE+ S   +G+  +V + L        RG                       +  
Sbjct: 603  MMGGTIEIDSTLGEGSTFRVRVTLT-------RG-----------------------DAS 632

Query: 909  EWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLS 968
            + V   GH +   L L   R           PA  R+L    LV D+D  NRLLI   L 
Sbjct: 633  KVVSLEGHGLGHPLDLPGPR-----------PAGRRIL----LVEDNDT-NRLLIATVLE 676

Query: 969  ELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQ-EISLFKGAVV 1027
              G +    +DG Q  + +S   E YDL++ D  MP +DG   TR ++          +V
Sbjct: 677  RSGHNVDTAADGRQGVDAVSAATEPYDLILMDMQMPEMDGPDATRAIRALSGPAAHTPIV 736

Query: 1028 GCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYLTTQWVALPE-----QSWLDA 1082
              TA+      ++ L +G+D ++ KP     LR+V+ R LT      P+        L  
Sbjct: 737  ALTADVRAEDRDRYLASGLDDLLTKPVDWTRLREVIER-LTGPGQTRPQVRPGGDEVLKR 795

Query: 1083 YQEEEREEMAMVVAESLAQDI-------------------------ALLNQPDCDVKALA 1117
               EE       V  SLA+ +                          + N    DV+  A
Sbjct: 796  AAWEEEPAFDGSVLASLAEQLGTNRLRPLITSAMANLSRHFDLLEKTMANGSAQDVRRSA 855

Query: 1118 HRIKGAAGSLQLQRLADLAKTVEKQNDPQQ 1147
            H +KG AG    +R   L+  +E++ D  Q
Sbjct: 856  HALKGMAGQFGARRAQALSLAIEEEADRPQ 885