Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 759 a.a., putative two-component sensor histidine kinase/response regulator hybrid protein from Phaeobacter inhibens DSM 17395

 Score =  162 bits (409), Expect = 1e-43
 Identities = 129/481 (26%), Positives = 218/481 (45%), Gaps = 64/481 (13%)

Query: 624  LFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKS 683
            L +  +E  E E AL ++ + A  A  A++ FLA +SHE+RTP+  ++G+ E++      
Sbjct: 212  LEDTFSERDEREYALEEARKAADIANRAKSEFLANMSHEIRTPMNGVIGMAELILETDLD 271

Query: 684  SESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQ 743
             +  +       S   L   +NDIL+FSKIEA +++L+   +NL   +  ++      A 
Sbjct: 272  EDQTMYAETISKSGSALLTIINDILNFSKIEAGKMELERAPFNLQTAIEDVVTLLSPKAA 331

Query: 744  LKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKI----DVAPEML 799
             K +E  + + P+       D  R  QI+TN+  NA+KFT +G V  ++    D     L
Sbjct: 332  EKNVEVTLRYDPSLPECYEGDVGRIRQILTNVAGNAVKFTGKGYVYIEVSGETDDDRTAL 391

Query: 800  TIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSE 859
             I V DTG G+ + +++ +F  F QAD   TR + GTGLG++I   L+ELM G+I V+SE
Sbjct: 392  RISVTDTGAGIPEDRLDRIFNAFEQADGAATRNYEGTGLGLAISTRLLELMGGRISVQSE 451

Query: 860  FEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIY 919
              +G+   ++LPL  +     R Q  A  ++          G+R              + 
Sbjct: 452  LGKGSVFAIDLPLRIRPSQPKRAQ-DARDFK----------GLRA------------LVV 488

Query: 920  PDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSD 979
             DL LNR                                  +++ ++L+  G+ +     
Sbjct: 489  DDLELNR----------------------------------IILTERLATWGVQSVAAGS 514

Query: 980  GLQAFEKL--SQHP-EQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRL 1036
              QA E L  S+H    YD+++ D  MP +DG  L  +++         +V  ++ ++ +
Sbjct: 515  AHQALELLLDSRHDGTHYDVILQDFQMPGMDGKELAERIRDIPEYRDLPIVILSSVENTI 574

Query: 1037 AAEQALQAGMDKVIYKPYTLANLRKVLSRYLTTQWVALPEQSWLDAYQEEEREEMAMVVA 1096
              E     G  +V  KP   A L+ V+SR L T     P+       +     E+ +++A
Sbjct: 575  DREAREHLGRCEVALKPLRAAQLQSVMSRVLETATEEAPQAVPPQGVETSVVPEVKLLLA 634

Query: 1097 E 1097
            E
Sbjct: 635  E 635



 Score = 49.3 bits (116), Expect = 1e-09
 Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)

Query: 950  VLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGF 1009
            +L+A+D+  N+L++ + L    +   + ++G +A     +H    D+++ D  MP  DG 
Sbjct: 631  LLLAEDNRTNQLVVSRMLKAAPIEVLIAANGEEAVTMFQEHHP--DIVLMDMMMPVKDGI 688

Query: 1010 ALTRKVKQ---EISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKP 1053
              T +++Q   +  L +  VV  TA   +   E+ L AGMD  + KP
Sbjct: 689  DATAEIRQLEKDNGLGRCPVVALTANALQSHREECLAAGMDDFLSKP 735