Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1358 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  167 bits (424), Expect = 4e-45
 Identities = 139/480 (28%), Positives = 215/480 (44%), Gaps = 83/480 (17%)

Query: 613  HPINQRKYYLTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLG 672
            +PI    Y      DITE K  E  L  + E A  A +A++ FLA +SHELRTP+  +LG
Sbjct: 916  NPIADGGYANIYGMDITERKNAELELINAREVAETATKAKSAFLANMSHELRTPMNGVLG 975

Query: 673  LMEILASRLKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQL---DIGLYNLAD 729
            ++++L +     E +  +  A ++   L   + D+LD +++E+ +L +         L  
Sbjct: 976  MLQLLDATPLDPEQRGYVQVAHAAGSNLTRLLGDLLDLARVESGRLTIREEPFDFNGLTQ 1035

Query: 730  ELGPLLRGFEASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVV 789
            E+  +LR  EA  +   +E      P +LL    D  R  Q++ N++ NA+KFTD+G V 
Sbjct: 1036 EVLAVLRP-EADRKGIVLEAATDGMPGALL---GDPQRIRQMLLNIVGNAVKFTDRGHVR 1091

Query: 790  FKIDVAPEM-------------------LTIVVEDTGCGMTQTQIESLFVPFAQADSTIT 830
                  P                     L + VEDTG G+    + ++F PF Q +  ++
Sbjct: 1092 LLARFEPSAGPSATAEPGGQGEPGGQGTLYLAVEDTGIGIPSDMLGNIFEPFTQVEDAVS 1151

Query: 831  RRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYR 890
            RR GG GLG+SIV  +++LM G++ + SE  +GT + + LP             VA   R
Sbjct: 1152 RRHGGAGLGLSIVRRIVDLMEGEVSMTSEEGRGTTVTLRLP-------------VAAMDR 1198

Query: 891  SPYMLWAKALGMRVEENEEWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHV 950
             P                                   +E +    A       RLL    
Sbjct: 1199 LP----------------------------------AQEPTRNGLADPPVRQGRLL---- 1220

Query: 951  LVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFA 1010
             + +DD +NRL +   L +LG  A  V DG  A + L Q   ++D ++ D  MP +DG  
Sbjct: 1221 -LVEDDHVNRLTVLWMLEKLGYDALAVGDGAAALQALRQ--GRFDAVLMDVQMPVMDGLQ 1277

Query: 1011 LTRKVKQEISLFKGA---VVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYL 1067
             T  ++    L  GA   V+  TA       E+ L AGMD  + KP  +  LR+VLSR++
Sbjct: 1278 ATAAIRNATDLPGGAEVPVIALTAYAMEGDRERLLAAGMDDYVEKPVDVQALRRVLSRFV 1337



 Score = 97.1 bits (240), Expect = 9e-24
 Identities = 119/455 (26%), Positives = 183/455 (40%), Gaps = 63/455 (13%)

Query: 628  ITELKETEQALRQSNEQALQAVEARN------------------HFLAVVSHELRTPIAA 669
            + E +E +QA R   ++A   + A N                   F A +SHELRTP+  
Sbjct: 153  VVETQERQQAERVEADEATSRLRATNAELAARCARAEELDVLKTRFFANISHELRTPLTL 212

Query: 670  MLGLME-ILASRLKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLA 728
            +LG +E +LA   +  E +  L   + +A  L  HV+D+LD S+++A  +Q      +L+
Sbjct: 213  LLGPLERLLAETSEDDEHRHSLFTMLRNARLLHQHVDDMLDLSRVDAGAMQPRHAEADLS 272

Query: 729  DELGPLLRGFEASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFT-DQGR 787
                     F+  A  + + + V       L A  D  ++ +I+ NLLSN+ KFT D G 
Sbjct: 273  ALTRTTCAYFDTLAAQRGMHYGV--QAPLRLDAQVDTDKYRRILLNLLSNSFKFTPDGGS 330

Query: 788  VVFKIDVAPEMLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLI 847
            V   ++   +   + V D G G+      ++F  + Q+        GG+GLG++IV    
Sbjct: 331  VSVTLERQGDEALLSVSDDGPGVPAHLRGAVFERYRQSGEGARGLHGGSGLGLAIVKEFA 390

Query: 848  ELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEEN 907
            EL  G   V    E G   QV LPL         G  VA +            G      
Sbjct: 391  ELHGGTTSVGQGAEGGALFQVRLPLAAPP-----GVEVAPA--------ESVAGSGSFAG 437

Query: 908  EEWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQL 967
            +     SGH                    Q  PA  R   G VLV +D   NR +I   +
Sbjct: 438  DPGWLASGH------------------VPQYAPAAGR-DGGLVLVVED---NRDMIAYIV 475

Query: 968  SEL--GLSATLVSDGLQAFEK-LSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKG 1024
              L       +  DG +   K L   P   DL++ D  MP +DG  +  ++++   +   
Sbjct: 476  DILRPHHQVAVAFDGEEGLRKALDLRP---DLIVCDVMMPRVDGQRMVEQLRRYPGMADV 532

Query: 1025 AVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANL 1059
             V+  TA+         L   +   I KP+T A L
Sbjct: 533  PVLMLTAKADDELRVHLLHGAVQGYIQKPFTAAGL 567