Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1499 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  164 bits (415), Expect = 5e-44
 Identities = 146/530 (27%), Positives = 239/530 (45%), Gaps = 79/530 (14%)

Query: 580  DQHEAEF--SIIIQAPKSNCSIGEHYFHVTRRAISHPINQRKYYLTLFNDITELKETEQA 637
            D+ E+ F  +I ++  K    +G+    V R     P+  R      F DI+ L E EQA
Sbjct: 988  DEPESVFWDNIPLRTAKGRRMMGQMKAVVQRGPDGRPVRARG----AFQDISRLYEAEQA 1043

Query: 638  LRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLK-------SSESQLLL 690
            L+++ E+A  A E ++ F+A +SHE+RTP++ +LG++++  SRL         +E    L
Sbjct: 1044 LQRAKEEAESANELKSQFVANISHEMRTPLSGILGIVDVALSRLNDTALPAHDNEQGHYL 1103

Query: 691  TNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIEFD 750
            +   + +E L   +ND+LDFS++EA +L LD   Y+L   +   L      A+ K +   
Sbjct: 1104 SMIRNVSEGLLHVINDLLDFSRMEAGRLGLDQVEYDLRAAVSDALAPLAVQAERKGLSLT 1163

Query: 751  VIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPE--------MLTIV 802
            V    +       D LR  QI+ NL  NA+KFTD       +DV            L   
Sbjct: 1164 VHIDADVPARLQGDPLRLRQILVNLAGNAVKFTDTDTGSVHVDVRRSAQCPRPGGCLRFT 1223

Query: 803  VEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQ 862
            V+DTG G+T  ++  LF  F+QAD + TRR  G+GLG++I  +++ L  G I V S   Q
Sbjct: 1224 VQDTGPGITADKLPLLFESFSQADGSHTRRHSGSGLGLAISRHIVRLQGGDIGVNSTPGQ 1283

Query: 863  GTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPDL 922
            G++    LP + +   +       +   SP             ++ +  E  GH      
Sbjct: 1284 GSRFWFTLP-IDKDAPQGAATPTDLRLTSP----------NPADSPDSPEVPGH------ 1326

Query: 923  LLNRLREVSNLTQAQTEPAHSRLLQGH----VLVADDDAINRLLIKKQLSELGLSATLVS 978
                            +PA     +      VL+A+D+ +NR  +   L E G    L  
Sbjct: 1327 ------------WGPAKPAEPGAQEAGRPLCVLLAEDNDLNREFLSFFLQERGYEVHLAI 1374

Query: 979  DGLQAFEKL------------SQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGA- 1025
            DG +A ++L             Q P  +D+++ D  MP + G   TR++++  +  +GA 
Sbjct: 1375 DGQEALDRLRGGCTPDSGIGGMQRP-PFDVVLMDVQMPVVSGLEATRRIREAAA--QGAA 1431

Query: 1026 -----VVGCTAEDSRLAAEQALQAGMDKVIYKPYT----LANLRKVLSRY 1066
                 V+  TA   +   ++ L  GMD  + KP       A + + ++RY
Sbjct: 1432 WADVPVIALTAHAMQGDRDRFLAEGMDDFVAKPVNREALFAAIERQVARY 1481



 Score = 30.4 bits (67), Expect = 0.001
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 625 FNDITELKETEQALRQSNEQALQA 648
           F DIT L +TEQALR S  + L+A
Sbjct: 901 FQDITRLHQTEQALRDSEARLLEA 924



 Score = 27.7 bits (60), Expect = 0.007
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 625 FNDITELKETEQALRQSNEQALQA 648
           F DIT L E EQALR+S  +  +A
Sbjct: 771 FQDITPLHEAEQALRESEARLQEA 794