Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1513 a.a., sensor/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  190 bits (483), Expect = 7e-52
 Identities = 140/446 (31%), Positives = 215/446 (48%), Gaps = 63/446 (14%)

Query: 627  DITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSES 686
            DIT+     +++ +++++A +A   ++ FLA VSHELRTP+   LG++++L     S E 
Sbjct: 1105 DITDAVNALESMCEASKRAEEANRTKSEFLANVSHELRTPLNGALGMLQLLELSSLSPEQ 1164

Query: 687  QLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKE 746
            +  +T AI S + L   ++DILD S+IEA +L ++    ++ + +  +   F   A  K 
Sbjct: 1165 RQYVTTAIRSGQNLVRLLSDILDLSRIEAGKLVIEAIPCDIRELVDEVFSTFSLDATGKG 1224

Query: 747  IEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPE-----MLTI 801
            I  +   +P +      D LR  Q + NL+ NA+KFT++G V  +   A       +L  
Sbjct: 1225 ITLETTIAPGTPTYVRTDPLRLRQTLFNLVGNAVKFTEKGGVRVEFSTASMRGDAIVLFC 1284

Query: 802  VVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFE 861
             V DTG G+ + +IES+F PF Q D + TRR  G GLG+ IV  L+EL  G IEV+S  +
Sbjct: 1285 TVRDTGPGIPEDRIESIFQPFTQLDGSYTRRHSGLGLGLGIVCRLMELFGGSIEVESAPD 1344

Query: 862  QGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPD 921
             GT                     AM +  P     +  G +V+E E+  E   H +Y  
Sbjct: 1345 MGT---------------------AMHFAIPVGKTRRPQGRKVKETED--EGDRHALY-- 1379

Query: 922  LLLNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGL 981
                                        +LVA+DDAINRL + + L +LG  A  V DG 
Sbjct: 1380 ----------------------------LLVAEDDAINRLTLTRMLEQLGHRAHAVEDGS 1411

Query: 982  QAFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVK--QEISLFKG-AVVGCTAEDSRLAA 1038
            QA + L++  + +D +  D  MP LDG A  + ++  Q   L     VV  TA   +   
Sbjct: 1412 QALQALAE--QHFDAVFLDIQMPVLDGMATLQAIRTGQVAGLPPTIPVVAVTAHAMQGDR 1469

Query: 1039 EQALQAGMDKVIYKPYTLANLRKVLS 1064
            E+ +  G D  + KPY    L K L+
Sbjct: 1470 ERFMAKGADAYVQKPYDFTALEKALA 1495