Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1005 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  174 bits (440), Expect = 4e-47
 Identities = 137/445 (30%), Positives = 211/445 (47%), Gaps = 66/445 (14%)

Query: 630  ELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSESQLL 689
            E + +   L  + E A  A  A++ FLA +SHELRTP+  MLG++++L +     +   L
Sbjct: 612  ERRRSLHRLSLAKEHAESANRAKSEFLANMSHELRTPLNGMLGMLQLLEAGDLDRDQNEL 671

Query: 690  LTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIEF 749
            +  A+ S   L   ++DILD S+IEA +++L    ++  + +  +   F   A+++ +  
Sbjct: 672  VHIALDSGRTLLRVLSDILDLSRIEAGRMELRHDRFSPEEAVRQVYDMFAQDARIRGLRL 731

Query: 750  DVIWSPNSLLLANF-DALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPEM-----LTIVV 803
               W  + L    + D  R  QI+ NLL NA+KFT +G V  ++           L   V
Sbjct: 732  R--WRCDELPCEVWGDGTRLRQILFNLLGNAMKFTHEGTVGVEVCAVRRTEESVRLLFSV 789

Query: 804  EDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQG 863
             DTG G+   ++ S+F PF Q D + TRR+ GTGLG+ IV  L+ LM G + V+S   +G
Sbjct: 790  SDTGIGIPHDRLMSIFEPFTQLDGSTTRRYSGTGLGLGIVRRLVHLMGGGLNVESALGEG 849

Query: 864  TQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPDLL 923
            T + V LP                 +R P                     SG  +  D++
Sbjct: 850  TAVHVCLP-----------------FRLP---------------------SGGGVTCDVM 871

Query: 924  LNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQA 983
                          + PA  R L+  VLVA+D+A+NR+ + + L  LG  A  V++GL+A
Sbjct: 872  -------------DSTPALRRPLK--VLVAEDEAVNRMTLSRCLHHLGHEAVCVTNGLEA 916

Query: 984  FEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGA---VVGCTAEDSRLAAEQ 1040
             E L +   ++D ++ D  MP LDG     +++ E      A   VV  TA       E+
Sbjct: 917  VEALRE--GRFDCVLMDIQMPELDGLEALARIRAEAGEQARALPPVVALTAHAMEGDRER 974

Query: 1041 ALQAGMDKVIYKPYTLANLRKVLSR 1065
             L AGM   I KP  L  L +VL R
Sbjct: 975  FLAAGMSAYIPKPIELGELERVLLR 999