Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., sensor histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  157 bits (398), Expect = 2e-42
 Identities = 139/506 (27%), Positives = 234/506 (46%), Gaps = 86/506 (16%)

Query: 614  PINQRKYYLTLFNDITELKETEQALRQSNEQALQAVE----ARNHFLAVVSHELRTPIAA 669
            P  +R+ Y T+  ++  LK   +A+R+ +E A QA E    A+  FLA +SHE+R  +  
Sbjct: 105  PFAERELYSTI--EVALLKH--RAVREIDE-ARQAAEHASLAKTSFLAGMSHEIRNTLNG 159

Query: 670  MLGLMEILASRLKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLAD 729
            ++G+ E++     S E +  L   ++S+E L   ++D+LDFS++EA+QL+L    ++L  
Sbjct: 160  IVGMTELVLDTPLSGEQRESLNTVLASSETLLTLLHDVLDFSRLEARQLRLVERPFSLDR 219

Query: 730  ELGPLLRGFEASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVV 789
             L  +++   + A+ K I  D   +P+       DA R  Q++ NL+ NA+KFT +G V+
Sbjct: 220  LLKQVVQASRSEAERKNISLDFRVTPDVPDRLTGDATRLTQVLANLVGNAVKFTHKGSVI 279

Query: 790  FKIDVAPEMLTIV-----------------VEDTGCGMTQTQIESLFVPFAQADSTITRR 832
             ++   P+  T++                 + DTG G+    + ++F  F+Q      +R
Sbjct: 280  IEVSAIPQDQTLLESLFPDGPPSSLTLLFSIRDTGIGIADEHLRTIFEAFSQGAEETVQR 339

Query: 833  FGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSP 892
            +GGTGLG++I  NL+E+M G I  +S   QG+           TC   R +  A++    
Sbjct: 340  YGGTGLGLAICRNLVEIMGGSIWARSSEGQGSSFHF-------TC-RLRPETPAIN---- 387

Query: 893  YMLWAKALGMRVEENEEWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLV 952
                                 S H   P             T + T  + +R L+  VLV
Sbjct: 388  -------------------TPSEHAQAP-------------TSSATPASGARPLR--VLV 413

Query: 953  ADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALT 1012
             DDDA  R +  K L + G       DG  A ++L+   +++DL++ D  M  + G  L 
Sbjct: 414  VDDDATGRTITCKMLRKRGHVCACAHDGATALQRLT--ADRFDLVLLDVKMHPMGGLELL 471

Query: 1013 RKVKQEISLFKGA-----VVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYL 1067
            R+++   + + G      VV  TA   +   E+ L +GM   I KP        +L R+ 
Sbjct: 472  RRIRN--AQYPGVDRNIPVVAVTAHALKGDRERFLASGMTDYIAKPINARAFNAMLDRFA 529

Query: 1068 TTQWVA-----LPEQSWLDAYQEEER 1088
             +   A     +P++S L A  E  R
Sbjct: 530  LSASSARDIPVIPDRSALLAPSEVVR 555