Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., two-component sensor histidine kinase from Caulobacter crescentus NA1000

 Score =  158 bits (399), Expect = 2e-42
 Identities = 131/436 (30%), Positives = 202/436 (46%), Gaps = 56/436 (12%)

Query: 630  ELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILA-SRLKSSESQL 688
            +L+     L ++ + A  A   ++HFLA +SHE+RTP+  +L + +++A  +L   + + 
Sbjct: 255  DLRGAMAELVKARDDANAANVLKSHFLANMSHEIRTPLNGVLAMADVMAMDQLSDIQRER 314

Query: 689  LLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIE 748
            L     S A  L + +ND+LD SKIEA +L++    +++A     +   F   A+ K + 
Sbjct: 315  LAVIRESGAVLLGV-LNDVLDLSKIEAGRLEIQDRPFDIAQLAQSIRETFVPQARAKGLA 373

Query: 749  FDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPEM--LTIVVEDT 806
            F+V  +P +  L   DA R  QI+ NL+SNA+KFT  G V  +   A +   L I V DT
Sbjct: 374  FEVGVAPEAQGLWRGDADRLRQILGNLISNALKFTLDGAVAVRFASAEDGSGLRIDVADT 433

Query: 807  GCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQI 866
            G G++   +  LF  F QADST TRRFGG+GLG++I   L  +MNG I+V+S   +G+  
Sbjct: 434  GIGISPEILPRLFDKFVQADSTTTRRFGGSGLGLAICRELAAMMNGSIKVQSREGRGSTF 493

Query: 867  QVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPDLLLNR 926
             V   LV    +E    V  +    P M                                
Sbjct: 494  TV---LVGLPREETLTDVHYIDDGDPIM-------------------------------- 518

Query: 927  LREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEK 986
                        EP   R     VL ADD+  N+ ++   L+ L    TLV DG    E 
Sbjct: 519  -------APPAAEPPRLR-----VLAADDNPTNQKVVAAVLAPLNADVTLVDDGAACVE- 565

Query: 987  LSQHPEQYDLLITDCHMPHLDGFALTRKVK---QEISLFKGAVVGCTAEDSRLAAEQALQ 1043
             +     +D+++ D HMP +DG    R ++   Q     +  ++  TA       E+ L 
Sbjct: 566  -AWKTGDFDVVLMDIHMPVMDGLEAARSIRATEQAEMRRRTPIIAVTANALTHQIEEYLS 624

Query: 1044 AGMDKVIYKPYTLANL 1059
             GMD  + KP  ++ L
Sbjct: 625  VGMDGHVAKPIEVSKL 640