Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  146 bits (368), Expect = 3e-39
 Identities = 84/221 (38%), Positives = 127/221 (57%), Gaps = 5/221 (2%)

Query: 154 YYQPQFDFRSGAMVGVEALVRYEHPTHGMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSAL 213
           +YQP+ D +SG +VGVEALVR+  P HG++ P+ F+P+ E  GL   L   VL+++    
Sbjct: 382 HYQPKLDLKSGKVVGVEALVRWNRPDHGLVYPSDFIPVAEDSGLIVPLSQWVLQEACQQA 441

Query: 214 ASIGAD----LQLSVNISQRNL-QHSICDPILAICERYGFPASKLTLEMTEHEVYNGTPT 268
               A     L LSVN+S  +  Q    + I    +  G   ++L LE+TE  +     T
Sbjct: 442 CRWQAQGMRPLYLSVNVSAIDFRQRGFVEGIARTLKETGLAPTQLELEITESVLMQNVDT 501

Query: 269 SLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPFTELKIDRSFVHDLATNYKHQQLTNM 328
           ++A L  ++  G+ L+IDDFGTGY+SL  L + P   LKID+SFV DL+ +    +L + 
Sbjct: 502 TVAILKAIKQLGIRLAIDDFGTGYSSLSYLQKFPVDVLKIDQSFVGDLSIDSNDAKLVST 561

Query: 329 CLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQGYYAAK 369
            + L +SL LH + EGVE  E  ++L++   +  QGYY +K
Sbjct: 562 IISLGKSLNLHIIAEGVETLEQLEFLKKHHCEEVQGYYFSK 602