Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1003 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  151 bits (382), Expect = 1e-40
 Identities = 93/276 (33%), Positives = 138/276 (50%), Gaps = 7/276 (2%)

Query: 109 YEVEDLQRVVEGFQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVG 168
           Y  ++L R    FQ  T    +         D +  A  +D     YQPQ D +SG ++G
Sbjct: 695 YRAKELGR--NSFQFYTSEMNNKVQGKLAMQDGLRSALNNDEFLLLYQPQVDLQSGQIIG 752

Query: 169 VEALVRYEHPTHGMLSPAVFLPLIEQCGLHEKLFLTVLEKSV---SALASIG-ADLQLSV 224
           VEAL+R++HP  GM+SP  F+P  E+ GL   +   V+  +     A    G   + +SV
Sbjct: 753 VEALIRWQHPELGMVSPIKFIPQAEETGLIVPIGDWVIHSACRQNKAWQDAGWPPITMSV 812

Query: 225 NISQRN-LQHSICDPILAICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGL 283
           NIS R  ++  + D ++   +  G     L LE+TE  +      +++ +  L+  G+ L
Sbjct: 813 NISARQFIERDLIDRVMHALQESGLDPMYLELELTESLIMQDLQQAISKMKALQAMGISL 872

Query: 284 SIDDFGTGYASLGQLAQLPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVE 343
           SIDDFGTGY+SL  L   P   LKID+SFV DL  N   + +    + L   L L  + E
Sbjct: 873 SIDDFGTGYSSLAALKSFPIARLKIDQSFVRDLPDNENDKAIATAVISLGHKLNLKVIAE 932

Query: 344 GVENEETWQYLRQLGVDTCQGYYAAKPMPIAQLSEL 379
           GVE EE   +LR  G D  QGY+ +K +   ++  L
Sbjct: 933 GVETEEQQTFLRDNGCDEIQGYFFSKAVSAQEIGLL 968