Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score =  156 bits (395), Expect = 1e-42
 Identities = 109/405 (26%), Positives = 197/405 (48%), Gaps = 12/405 (2%)

Query: 1   MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCN--KVGIDLMFCDIRMPQM 58
           + ++I++D       L     +L +  V    +G  AL+     +    ++  D+ MP M
Sbjct: 3   LNVLIIDDSLSYCQLLSKYFSELNVTSVDYCHDGSEALQRLRERRDRYQILVVDLHMPGM 62

Query: 59  DGISLLSQLSLQAPKLGVVILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVV 118
           DGI LLS+LS    + GV+I S +E  I+E    +   A    +  L KP     L   +
Sbjct: 63  DGIELLSKLSGLEYRGGVIIASGMESRIIEAASQIVLGAHLRLLGALMKPVCKTQLNICI 122

Query: 119 EGFQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHP 178
           E          + KPA+TL    + ++   + +  YYQPQ +  +G + G E L R +  
Sbjct: 123 ERLLMMVPELNTSKPAMTL--QSLRESIKQNKVVPYYQPQVEVGTGRIEGFEVLCRMQLG 180

Query: 179 TH-GMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGAD-----LQLSVNISQRNLQ 232
               +++P  F+ L E+  L   +   ++  ++   A IG        +LS+N++   L 
Sbjct: 181 AQLQLMTPDRFMALAERYNLLNAVSEQLIGTALKEWAEIGLQPECRHARLSINLTPSQLG 240

Query: 233 HSICDP-ILAICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTG 291
            S     +L+ C ++    S++T+E+TE++  +   +  + ++RLR++  G++IDDFGTG
Sbjct: 241 QSYWPRRLLSFCHKWQVDISRVTVEITENQALD-KQSQHSGISRLRLHNFGVAIDDFGTG 299

Query: 292 YASLGQLAQLPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETW 351
           Y +L QL +LP +ELK+D S V  +  +   Q +    L + + LG+  V EGVE+   +
Sbjct: 300 YTNLTQLCRLPISELKLDISLVRGIHMDPLAQTILKSLLDIGRQLGVSVVAEGVEDPRDY 359

Query: 352 QYLRQLGVDTCQGYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDG 396
           +YL  +     QG+   +P P+ +L       +R  +  + ++ G
Sbjct: 360 RYLESVPGLIVQGFLVCRPKPLGELVRWLKARQRVAVDTKGLEAG 404