Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1094 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  150 bits (378), Expect = 3e-40
 Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 12/270 (4%)

Query: 127  PETSHKPAITLTCDE-IEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTHGMLSP 185
            P+ ++     +T ++ +  A L      +YQP  D  SG  V +EAL+R+ HP  G++ P
Sbjct: 821  PDMNNNMLARITLEQSLRSAVLQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPP 880

Query: 186  AVFLPLIEQCGLHEKLFLTVLEKSVSALA---SIGADLQLSVNISQRNLQHSICDPILAI 242
              F+P+ E+ GL E +   V+++++  L    S G  + +++N+S R L H   DP    
Sbjct: 881  DEFIPIAEETGLIEPIGEWVIQQALRDLRQCHSQGIMINMAINVSGRQLAHG--DPSHFA 938

Query: 243  C------ERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLG 296
            C      ++Y      + +E+TE  +   T  SL  L  +R  GV + +DDFGTGY+SL 
Sbjct: 939  CMLNGLLQKYDVAPQYVHIEITESILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLS 998

Query: 297  QLAQLPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQ 356
             L Q P + +KID+SFV ++  +     L    + + QSL +  V EGVE+E    +L+ 
Sbjct: 999  YLKQFPISVIKIDKSFVDNMLEDRADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQG 1058

Query: 357  LGVDTCQGYYAAKPMPIAQLSELYTKNRRQ 386
            LG D  QGY  AKPMP+ +L  L  +  R+
Sbjct: 1059 LGCDFVQGYLVAKPMPLKELEPLLRRIVRE 1088