Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  159 bits (403), Expect = 6e-43
 Identities = 90/251 (35%), Positives = 141/251 (56%), Gaps = 7/251 (2%)

Query: 142  IEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTHGMLSPAVFLPLIEQCGLHEKL 201
            ++QA  H+ +   YQP+F  R+G++ G+EAL+R++H   G +SPA F+PL E+ G+  ++
Sbjct: 1261 LKQAISHNELSLVYQPKFCLRNGSLTGLEALLRWQHSELGPISPAEFIPLAEETGMINQI 1320

Query: 202  FLTVLEKSVSALASIG----ADLQLSVNISQRNLQHSICDPILAICERYGFPASKLTLEM 257
               V+ +S   LA       +D+ ++VN+S R L+  I   I       G PA  L LE+
Sbjct: 1321 GHWVINQSCQQLAEWNELGFSDISMAVNLSARQLKADIISTIEVALAVSGLPAKALELEL 1380

Query: 258  TEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPFTELKIDRSFVHDLA 317
            TE  +      S+  L++L+  G+ +++DDFGTGY+SL  L + P   LKIDR FV D+ 
Sbjct: 1381 TESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDIT 1440

Query: 318  TNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQGYYAAKPMPIAQLS 377
             +     +T+  + LA SL L+ V EGVE +E   +L   G D  QG+  +KP+      
Sbjct: 1441 NDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLALQGCDQVQGFLLSKPLSAQDCQ 1500

Query: 378  ELY---TKNRR 385
             L    TK+R+
Sbjct: 1501 TLLQQRTKDRQ 1511