Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1413 a.a., sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  159 bits (401), Expect = 1e-42
 Identities = 95/235 (40%), Positives = 137/235 (58%), Gaps = 17/235 (7%)

Query: 155  YQPQFDFRSGAMVGVEALVRYEHPTHGMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALA 214
            YQP FD RS A++G EALVR+ HP  G++ P  F+P+ E+ G+  +L   VLE +++ALA
Sbjct: 1162 YQPVFDTRSRALLGFEALVRWRHPLRGLIPPTAFIPVAEETGIITRLGHWVLETALTALA 1221

Query: 215  SIGA------DLQLSVNIS-----QRNLQHSICDPILAICERYGFPASKLTLEMTEHEVY 263
                      DL ++VN+S     Q  L  S+ D +    ++ G PAS L +E+TE  + 
Sbjct: 1222 RWRLQIPGIDDLYVAVNMSALQFAQPTLPGSVRDAL----QKTGLPASCLKVEITETAIM 1277

Query: 264  NGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPFTELKIDRSFVHDLAT--NYK 321
                T+L  ++ LR  GVG+ IDDFGTGY+SL  L + P   LK+DRSFV    T     
Sbjct: 1278 QDPTTALQRISALRDLGVGIGIDDFGTGYSSLAYLQRFPVDTLKVDRSFVSQSTTPEGEG 1337

Query: 322  HQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQGYYAAKPMPIAQL 376
            ++++    ++LA SL L  V EGVE EE + +L  LG D  QGY  ++P+P A +
Sbjct: 1338 NREIVRAVVVLAHSLSLAVVAEGVETEEQFAFLAGLGCDAVQGYLLSRPVPEADI 1392