Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1228 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  152 bits (384), Expect = 8e-41
 Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 5/235 (2%)

Query: 142  IEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTHGMLSPAVFLPLIEQCGLHEKL 201
            + QA   + +  YYQPQ D  SG +VGVEAL+R++HP  G+++P  F+P+ E+  +   +
Sbjct: 981  LRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPI 1040

Query: 202  FLTVLEKSVSALASI----GADLQLSVNISQRNLQH-SICDPILAICERYGFPASKLTLE 256
               VLE +++ LA         L+++VN+S   L+  +I   I+ +  ++      L LE
Sbjct: 1041 GQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELE 1100

Query: 257  MTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPFTELKIDRSFVHDL 316
            +TE         +   LA LR +G+ L+IDDFGTGY+SL  L  LP   LK+DRSFV D+
Sbjct: 1101 ITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDI 1160

Query: 317  ATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQGYYAAKPM 371
             ++     ++   + +A  LGL  V EGVENE     L  +G D  QGYY +KP+
Sbjct: 1161 ESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPL 1215