Pairwise Alignments

Query, 553 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., DNA-binding transcriptional regulator TorR (RefSeq) from Shewanella loihica PV-4

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 17/176 (9%)

Query: 11  VLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNFGKGLN 70
           VL++DD  ++ A L+    K G+    ++ +           +Q  D+ + D N   G++
Sbjct: 10  VLVVDDEAVIRARLKGYFEKEGY---RVLEAADGEEMWQQFSQQHIDLVMLDINL-PGVD 65

Query: 71  GKQVFEELKHYKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQERLTNA 130
           G  +  EL+     + +   +LVTG + A      LE+  D+Y+ KPF +  L  R+ N 
Sbjct: 66  GLSLTRELRS----RSEVGIILVTGRDEAIDKIIGLEMGADDYVTKPFELRELLVRVKNL 121

Query: 131 ISRKHALKALYQAERDGDAELGLSLCDELEPFYNDYYFVIQKFR---GEFLTQLRR 183
           + R   +K   +A++   AE  L  CD+L  F  DY   +   R   GE + +L +
Sbjct: 122 LWRISLVK---KAQQQAIAE--LERCDDLIEF-EDYSLALNSRRLSQGEAVIKLTK 171