Pairwise Alignments

Query, 553 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain from Dechlorosoma suillum PS

 Score =  118 bits (295), Expect = 7e-31
 Identities = 84/310 (27%), Positives = 137/310 (44%)

Query: 6   FAELKVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNF 65
           F     L+IDD   +   LR +L  +G     I  + +   A+    + RFD  +CD+N 
Sbjct: 9   FGSKSFLVIDDFQGMRTVLRDILRSMGVNPKVIATAANGNEAISQLSQTRFDGVLCDFNL 68

Query: 66  GKGLNGKQVFEELKHYKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQE 125
           G G NG+QV EE K+  L+     +V++T E +A VV    E +PD Y+LKP    TL+ 
Sbjct: 69  GAGKNGQQVLEEAKYRNLVGPSCAWVMITAEKTADVVMGAAEYQPDAYLLKPITESTLRL 128

Query: 126 RLTNAISRKHALKALYQAERDGDAELGLSLCDELEPFYNDYYFVIQKFRGEFLTQLRRFD 185
           RL     +K A   + QA    D  L + LCDE           + + +   L      +
Sbjct: 129 RLEKIWVKKAAFVDIDQAVMAMDFPLAIRLCDERLAVDKANAGELLRLKCHLLLVSGEHE 188

Query: 186 HAREVYLETLEHKDFDWAKIGLANALKQTGRQVEATQVIQELLASAPNNVRARVEAASIS 245
            AR +Y   L  +D  WA++GLA      G    A  +++ L+A     + A    A++ 
Sbjct: 189 QARLLYNALLAKRDVPWAQLGLARVHVAAGELDHAQALLETLVAENRTYLEAHDWLANVH 248

Query: 246 LCNNSIPEAIHHLQVANQIVPGHSEREWVLANLCLSVGDGASALERYRLYVEINKETYRN 305
                + +A   L+ A ++ P    R+  L  + L +G   +A + +R  V + + +   
Sbjct: 249 NARGDLQKAEEVLENAARLSPLSVMRQKNLGEVSLQLGKVENAEKAFRKSVALGEHSVLK 308

Query: 306 NHQMHLNFIR 315
               +L   R
Sbjct: 309 TPDAYLGLAR 318