Pairwise Alignments

Query, 553 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., torcad operon transcriptional regulatory protein TorR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.8 bits (112), Expect = 5e-10
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 8/133 (6%)

Query: 11  VLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNFGKGLN 70
           VL++DD  ++ A L+    K G+    +V +       +   RQ  D+ + D N   G++
Sbjct: 5   VLVVDDEVVIRARLKGYFEKEGY---RVVEAADGEQMWYEFNRQHIDLIMLDINL-PGVD 60

Query: 71  GKQVFEELKHYKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQERLTNA 130
           G  +  EL+     +     +LV+G + +      LE+  D+Y+ KPF +  L  R+ N 
Sbjct: 61  GLSLTRELRS----RSHVGIILVSGRDESIDKIVGLEMGADDYVTKPFELRELLVRVKNL 116

Query: 131 ISRKHALKALYQA 143
           + R   +K   QA
Sbjct: 117 LWRISLVKQAEQA 129