Pairwise Alignments

Query, 553 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., response regulator receiver protein (RefSeq) from Shewanella sp. ANA-3

 Score = 52.0 bits (123), Expect = 6e-11
 Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 8   ELKVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNFGK 67
           +++ LI++D   +   +   L +LGF +  ++ +   R A+ M  R   D+ + D++   
Sbjct: 5   QMQCLIVEDMDALRKIMAEQLRQLGFGQ--VLQADCGRQALDMLQRMHIDLLLLDWSMPD 62

Query: 68  GLNGKQVFEELKHYKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQERL 127
           G +G+++ E L+      QD   ++VT      +V   ++    + I KPFN  TLQ R+
Sbjct: 63  G-HGQELLESLRQQDKW-QDLPIIIVTANAHRSLVEVAMKYGVLDIIAKPFNSKTLQARV 120

Query: 128 TNAISRKH 135
             A++R+H
Sbjct: 121 LQALTRRH 128



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 13/136 (9%)

Query: 11  VLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMA-GRQRFDIFICDYNFGKGL 69
           VL++DD P  +A +  +L      +  ++++K  +A + +       D+ + D    + +
Sbjct: 158 VLVVDDMPDNLAFMAGLLND----DYKVLFAKDGKAGLKICQSATPPDVVLLDVMMPE-M 212

Query: 70  NGKQVFEELK-HYKLIKQDAVFVLVTGENSAYVVHSILELKPD--EYILKPFNIMTLQER 126
           +G QV + L+   +  +   +FV   GE    V H +  L+    +Y+ KP     L+ +
Sbjct: 213 DGHQVLQALRTEPRSAEIPVIFVSALGE----VEHHLQGLRGGAIDYLTKPVQPEILKLK 268

Query: 127 LTNAISRKHALKALYQ 142
           L N +++    +AL Q
Sbjct: 269 LANVLAQVQRQRALQQ 284