Pairwise Alignments

Query, 818 a.a., collagenase from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., collagenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  190 bits (483), Expect = 9e-53
 Identities = 102/254 (40%), Positives = 143/254 (56%), Gaps = 15/254 (5%)

Query: 318 ILPNRFECQGPAIIRSQDLSDAQAAQACDVLDKKEQDFHQVANTGLAPVADDYNTRVEVV 377
           +LP R +C     + +QD++D Q A  C  L  +E DFHQ   T   PVA+DYN  + VV
Sbjct: 40  VLPIRVDCSATINLWAQDMTDPQIADTCAQLSSQESDFHQRMQTFGEPVANDYNDSLRVV 99

Query: 378 VFANNSSYVNYSSFLFGNTTDNGGQYLEGNPADQNNQARFVAYRYANDAD-----LSILN 432
           VF + S Y  Y   LF  +T+NGG Y+EGNPAD NNQA F    YA++AD       I N
Sbjct: 100 VFDDYSQYDKYGYELFNISTNNGGIYIEGNPADVNNQASF----YAHEADWLLPEFEIWN 155

Query: 433 LEHEYTHYLDARFNQYGSFSDNLAHGHIVWWLEGFAEYMHYKQGYQAAVKLI----SQGK 488
           L HEY HYL+ RF  YG F  N     +VWW EG AEY+        AV L     +  +
Sbjct: 156 LRHEYIHYLEGRFVSYGGF--NFYPSKMVWWAEGLAEYLSLGSDNATAVNLALNTRANRR 213

Query: 489 LSLSDVFATTYSNDTNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQWAQSVKLLG 548
            +L+ +F+T+Y + T+R+YRW YLA+RF+ E+H  +V ++    +  QF  +  ++    
Sbjct: 214 PTLAAIFSTSYRDGTDRVYRWSYLAIRFLFERHEAEVLAMTEHLKHNQFASYEAALGQFA 273

Query: 549 ERYNTEFSAWLDTL 562
             Y  EF+ W++ L
Sbjct: 274 TNYQAEFAEWMNGL 287