Pairwise Alignments

Query, 818 a.a., collagenase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., collagenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  192 bits (489), Expect = 2e-53
 Identities = 105/273 (38%), Positives = 149/273 (54%), Gaps = 21/273 (7%)

Query: 318 ILPNRFECQGPAIIRSQDLSDAQAAQACDVLDKKEQDFHQVANTGLAPVADDYNTRVEVV 377
           +L    +C    IIR+Q L+ +Q  +AC +L  +E+ FH + +T   PV DD N  +   
Sbjct: 26  VLTITHQCSPTLIIRAQALAQSQIDEACTLLSTQEKRFHTLLDTHNRPVRDDNNVAMRAN 85

Query: 378 VFANNSSYVNYSSFLFGNTTDNGGQYLEGNPADQNNQARFVAYRYANDADLSILNLEHEY 437
           ++AN  +Y  Y +  F   +DNGG YLEG+P    NQA FVAY+        I NL HEY
Sbjct: 86  IYANADAYRTYVTAHFDVPSDNGGMYLEGHPEHPGNQAEFVAYQKQG----KIWNLRHEY 141

Query: 438 THYLDARFNQYGSFSDNL--AHG-------------HIVWWLEGFAEYMHYKQGYQAAVK 482
            HYLD RFN YG F  +L  +H              H+VWW EG AEY+ +     AA++
Sbjct: 142 VHYLDGRFNLYGDFCASLHDSHSAPEYCPKPAPLLPHLVWWSEGLAEYLAWGDDNPAAIE 201

Query: 483 LISQGKLSLSDVFATTYSND--TNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQW 540
           L ++G   LS++F T+Y  +  + RIYRWGYLAVRFM+E H   +E +L  +R G + ++
Sbjct: 202 LAAKGSYRLSEIFDTSYEQNGGSERIYRWGYLAVRFMMEHHRDKLEQMLGFTRNGDYPRY 261

Query: 541 AQSVKLLGERYNTEFSAWLDTLQRDNPDNPDNP 573
              V+      + EFS WL  + +  P    NP
Sbjct: 262 QALVREWHTSMDGEFSLWLKKISKKLPMAGTNP 294