Pairwise Alignments

Query, 818 a.a., collagenase from Vibrio cholerae E7946 ATCC 55056

Subject, 775 a.a., peptidase M4, thermolysin (RefSeq) from Shewanella amazonensis SB2B

 Score = 43.9 bits (102), Expect = 3e-08
 Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 8/124 (6%)

Query: 588 PNPEPNAVTQLAANSSLTLTGKAYSEHLFYVDVPEYSREFHVQISG-EGDADLYMSYQQV 646
           P P P A       +   ++G + S+  + +DVP  +      +SG  GDADLY+ +   
Sbjct: 498 PPPPPEAEVLQNGVAVTDISGASGSKQYWTLDVPAGASNLVFNLSGGSGDADLYVKFGAN 557

Query: 647 AHYYDYQVTEFTYGSNEQITFKPEQNGYIKPGRYYLSVTGRADYSAVIL--NTHLVTEQP 704
               DY    +  G+NE           ++ G Y++ + G + YS   L  +    + +P
Sbjct: 558 PTSTDYDCRPYAAGNNENCAI-----SNVQQGTYWVMLNGYSSYSGTTLVGSFDGGSTEP 612

Query: 705 NEQP 708
           NE P
Sbjct: 613 NEAP 616



 Score = 29.3 bits (64), Expect = 9e-04
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 732 QRYVAIYVPKGVSEVQVWLTASEQNRGNVDLFAAKAYWPTREQFEHASTGAGSHEYLRIP 791
           ++Y  + VP G S +   L+      G+ DL+      PT   ++     AG++E   I 
Sbjct: 523 KQYWTLDVPAGASNLVFNLSGGS---GDADLYVKFGANPTSTDYDCRPYAAGNNENCAIS 579

Query: 792 VTQEGYVHFSLNAQQLGDTVEMVAYFD 818
             Q+G     LN         +V  FD
Sbjct: 580 NVQQGTYWVMLNGYSSYSGTTLVGSFD 606