Pairwise Alignments

Query, 587 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., putative periplasmic solute-binding protein from Klebsiella michiganensis M5al

 Score =  162 bits (411), Expect = 3e-44
 Identities = 144/585 (24%), Positives = 244/585 (41%), Gaps = 32/585 (5%)

Query: 4   LNLLRYYARLTPLGVGHDIKTTLPELAERLFTSPRHARNLLVRLNQLGWLTWTPKAGRHH 63
           LN L  Y RL     G   + T+ ELAER F S RH R LL +  + GWL W   +GR  
Sbjct: 4   LNRLHQYQRLWEPSSGEPQQVTVGELAERCFCSERHIRTLLRQAQESGWLRWQASSGRGK 63

Query: 64  RSSLLLHRELEPLKEQLAAKRVQIGKYERALAILDNDEVAFAKLLKKTSGATVQEGRLHI 123
           R  L  ++  E L+ ++  + +  G+ + AL +     V    LL    G   Q     +
Sbjct: 64  RGLLQFYKAPETLRNEMMEQALSKGQQQNALELAQLAPVELKALLSPFLGGQWQNDTPTL 123

Query: 124 QLTYKRPFEPLLPHLPQRSSERFLIRQIYSCLVSSDANGHVH-PELAHHWHYDPHTWQWT 182
           ++ Y RP EPL P      +E+ L  +I+S L   DA+      +LAHHW   P   +W 
Sbjct: 124 RIPYYRPLEPLRPGFMPGRAEQHLAGEIFSGLTRFDAHSTCPIGDLAHHWEVSPDGLRWH 183

Query: 183 FYLRPELTFHNGAPLDANTIVSLFAKLSSLETHRAELAHISDIKAPTPFQVVFNLERPDP 242
           FY+R  L +HNG P+  + +      L  L   R   A IS+I       +   L R D 
Sbjct: 184 FYIRSTLFWHNGDPIKTSQLQQRLLMLLQLPALRTLFASISEINVTHSQCLTITLHRADY 243

Query: 243 GFAGMISGVKYAIQPVSQLNYSQFHEGQIVPVIGCGPFEVQEHTRNKLKLKAFSQFYGCR 302
                         P    +Y         P IG GPF ++  T   ++L+   +++   
Sbjct: 244 WL------------PFRLASYCSVLAHPDDPAIGSGPFRLKLFTPELVRLENHQRYHLTH 291

Query: 303 ALTDRVTIWQVDEERLSRPLIETNQPEANTTSHH--QVSLSDSPHLTSAAQQQSRVEDG- 359
            L   V  W      ++  L E    +  T+  H  Q+++ D   LT   Q  + +  G 
Sbjct: 292 PLLQAVEYW------ITPQLFE---QDLGTSCRHPVQITIGDPDELTRLRQVSNSISLGF 342

Query: 360 CLMVLFNQRAKQPLDQAQAHRLSELLNPNTIEQDIRCHGEMFGVEPAHNLLPSWRAVLKS 419
           C + L   R    L++AQA RL  L++ +T+ + +    +   + P++ +LP W      
Sbjct: 343 CYLTL---RQSPRLNKAQAQRLVSLIHRSTLLETLPLDED--PIAPSNEILPGWSIPQGP 397

Query: 420 PAPKVALPTQLTLALYNYTALQTCAQAIARLLAAQGITLSIHTYTYRELNQRALKGELDE 479
                 LP +LTL  +    L   A+ + + LA  G  L+I  +  +  +      + D 
Sbjct: 398 ENYDTPLPERLTLLYHLPVELHAMAEQLRQRLAELGCELTIIFHDAKNWDGCGHFAKAD- 456

Query: 480 TLVLTNINLDDNRHASAFAMLFSNPILHACASQDEVIWLMQQLNAVREQAQLPQYLDQLE 539
            L++ +  + +    +    L  + +     +  +   L   L+AV+         + L 
Sbjct: 457 -LMMGDRLIGEAPVYALEQWLRCDALWPNLLTGAQYAHLQATLDAVQALPDERSRSEALR 515

Query: 540 PIASLLVSESWLAPLFHHRQTLRFHGVLHDVALTNWGWPDIRNVW 584
            + + L+ ++ + PLF++   +     ++ + L   GW D  + W
Sbjct: 516 NVFNRLMDDAIMTPLFNYNYRISAPPGVNGLRLNARGWFDFASAW 560