Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  263 bits (671), Expect = 2e-74
 Identities = 185/552 (33%), Positives = 307/552 (55%), Gaps = 28/552 (5%)

Query: 52  SVGLRLKLIVVLIVVSILFLGFKGLTGMQSASDSIESLYTKGMQHTIRAGRILDE--LGS 109
           ++  R  L   LI V +  LG   L  M S  DS  ++ T+ +  +IR G  + E  L  
Sbjct: 7   NIAPRAALGFALIAVLVALLGVFALGQMSSIRDSEVAVETQWLP-SIRGGDEIREWMLRI 65

Query: 110 ARSQLLLAFQHDPSSKYALMHDHPITMHVEGIQTSLTNL-HRIVDNEILATVLDVQEKAV 168
               L +A   DP +         I ++   + T    L  +I   E L  V+  + KA+
Sbjct: 66  RTISLRMALDQDPKN---------IAVYRGQMDTRDKELSEKIAAYEKL--VVTPEGKAL 114

Query: 169 IQTLKEKLDQVTR---QGFEPALQQLKAEKYDAANLILLQVINPLYNEIKKAAEAF---L 222
               K+          Q F  A Q  + E      + +  V++    ++   AE F   +
Sbjct: 115 YDQFKQTFAAYRTGIAQSFTLAEQGRRDELIKLLLVDMKTVVDGSGKQLNDLAELFSKQV 174

Query: 223 DIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATH 282
            I++Q+ + +++ S+        +VSL   FA + T +LA+L+ + +   +    ++A +
Sbjct: 175 SIESQKSQEHYANSR-------MVVSLFVVFAALATVALAMLLTRSIVKPLGEALNAAEN 227

Query: 283 IAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQT 342
           +A GDLT+ I   GNDE S + K +  +  + +E +     S + LATAA+E  AV + +
Sbjct: 228 VARGDLTRPIETHGNDEVSRLLKALAAMQQNLRETLQGISGSAAQLATAADELNAVTLDS 287

Query: 343 KQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMI 402
            Q++ +Q ++ +Q A A+ + T  V EVA++A   ++A+ ++ ++A  G++ V + +  I
Sbjct: 288 TQSLQQQNNEIEQAATAVTEMTTAVEEVARNAVSTSDATRQSSESASLGQQRVSDTVDAI 347

Query: 403 EGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFA 462
             L++D+Q     +Q LA  S+DIG V+DVI++I+EQTNLLALNAAIEAARAGE GRGFA
Sbjct: 348 GALASDVQVTGGLVQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFA 407

Query: 463 VVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALS 522
           VVADEVR LA RTQ+ST++I Q VQ ++  +  + + ++   S A+  +  A  AG AL 
Sbjct: 408 VVADEVRALAYRTQQSTQEIEQMVQGMRSGATQALDSMQASSSRAASTLAMAERAGDALQ 467

Query: 523 QITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELAR 582
            ITA+V+ I   N  IA+A+EEQ+ V  E+++N++ I ++S ++A GA Q+S ++ EL++
Sbjct: 468 TITASVNEIHERNLVIASAAEEQAQVAREVDRNLVNIRDLSVRSASGADQTSASSHELSQ 527

Query: 583 LAESMQQEVARY 594
           LA S++  V R+
Sbjct: 528 LANSLRTMVQRF 539