Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  251 bits (640), Expect = 7e-71
 Identities = 143/351 (40%), Positives = 225/351 (64%), Gaps = 3/351 (0%)

Query: 244 IWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDI 303
           I +VS+  A A +V   LALL+ + +   ++    +A  IA+G+L Q I   G DE   +
Sbjct: 192 IIIVSISAALATVV---LALLLTRSIVAPLNRALEAARTIASGNLVQVIADDGKDEPGRL 248

Query: 304 AKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQF 363
            + +  +  S ++ I     S + L  AA+E +AV  ++ + + +Q ++ +Q A A+++ 
Sbjct: 249 LQALATMQVSLRQTIEQIAGSATQLGAAAQELSAVTQESSRGLQQQHNEIEQAATAVNEM 308

Query: 364 TATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDS 423
           TA V EVA++A   +EAS ++ QAA +GR  V E +  I+ +++D+Q   + ++ LA   
Sbjct: 309 TAAVEEVARNAVSTSEASNQSTQAAQEGRTRVVETVDAIQTMTHDVQATASMIEGLAVQG 368

Query: 424 EDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQIL 483
            DIG V+DVI++I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT +ST++I 
Sbjct: 369 RDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIE 428

Query: 484 QTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASE 543
           + V  +Q  +  +   ++Q        +E AR AG AL QIT ++ +I+  N  IA+ASE
Sbjct: 429 KMVAGIQNGTGQAVQSMQQSNQRTQSTLEMARAAGVALEQITQSIHQINERNLVIASASE 488

Query: 544 EQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
           EQ+ V+ E+++N++ I +++ Q+A GA+Q+S+AT EL+RLA  +   VAR+
Sbjct: 489 EQAQVSREVDRNLVNIRDLATQSASGAKQTSDATHELSRLAVGLNAMVARF 539