Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  261 bits (666), Expect = 8e-74
 Identities = 144/341 (42%), Positives = 217/341 (63%)

Query: 254 ALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTS 313
           AL+     AL+I +++   +      A  +AAGDLT  +     DE   + + +  +   
Sbjct: 292 ALLFGVIAALVITRQIVGPLGQTLKIAERVAAGDLTHNLTSERRDELGQLQRAMQNMTVG 351

Query: 314 FQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQS 373
            +++I      V+ +A+AAE+ +AV +QT   +  Q+++T Q+A A+H+ TATV EVA +
Sbjct: 352 LRQLIGGISEGVTQIASAAEQLSAVTVQTSAGVNSQKAETDQVATAMHEMTATVQEVASN 411

Query: 374 AGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVI 433
           A  A+EA+  A+  A +G KVV E IA IE L+ ++     AM  L ++S+ IGSV+DVI
Sbjct: 412 AEEASEAAVAADAQAREGDKVVGEAIAQIERLALEVGNSTTAMGELKRESDKIGSVLDVI 471

Query: 434 QSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSS 493
           +S+++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ+ST++I + +  LQ  +
Sbjct: 472 KSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELILGLQSGT 531

Query: 494 RDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEIN 553
              A  ++   S    +VE  R AG +L  IT  V  I  MN QIA A+E+QSAV EEIN
Sbjct: 532 EQVAATLDNSRSLTDSSVELTRRAGASLENITRTVSAIQAMNQQIAAAAEQQSAVAEEIN 591

Query: 554 KNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
           ++++ + ++S QTA  +++++ ++ ELARL   +Q  V R+
Sbjct: 592 RSVLNVRDVSEQTASSSEETAASSAELARLGVHLQTLVGRF 632



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 60/310 (19%), Positives = 119/310 (38%), Gaps = 43/310 (13%)

Query: 319 SSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAA 378
           +++R    +   A+ +NA   +   +  + Q     Q   A+    A      Q  G   
Sbjct: 126 TASREDARSKLGASADNAVARVAEVEKSLLQGDSVAQFNNAVTLSKAIQQARYQVRGYTY 185

Query: 379 EASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISE 438
               EA+Q A++    ++  + ++  L   L +  A     A DS      ++V ++   
Sbjct: 186 SGKNEAQQPALEA---IDNVLKLLARLPEQLPEEHAVNLQQANDS------INVYRAAVS 236

Query: 439 QTNLLALNAAIEAARAGEQG-------RGFAVVADEVRTLASRTQES------------- 478
           Q     ++ A    R  EQG       +   V    VR L +   ++             
Sbjct: 237 QFRDSQIDNAAALKRMAEQGDVLIDASQKLTVSQTAVRDLDAAKAKTFLVSAAVLALLFG 296

Query: 479 -------TKQILQTV-QRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDR 530
                  T+QI+  + Q L+ + R +A  +   ++  S+  ++      A+  +T  + +
Sbjct: 297 VIAALVITRQIVGPLGQTLKIAERVAAGDLTHNLT--SERRDELGQLQRAMQNMTVGLRQ 354

Query: 531 ----ISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAES 586
               IS   TQIA+A+E+ SAVT + +  + +    ++Q A    + +    E+A  AE 
Sbjct: 355 LIGGISEGVTQIASAAEQLSAVTVQTSAGVNSQKAETDQVATAMHEMTATVQEVASNAEE 414

Query: 587 MQQEVARYNA 596
             +     +A
Sbjct: 415 ASEAAVAADA 424