Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  244 bits (624), Expect = 5e-69
 Identities = 144/387 (37%), Positives = 234/387 (60%), Gaps = 10/387 (2%)

Query: 214 IKKAAEAFLDIQTQEGKN-NFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNA 272
           I  A +  ++I   + +  N  A+Q   + F W+V+LL     ++ T L LL A  + N+
Sbjct: 154 INAAIDRLVEINNLQAEALNKGAAQQYSSAFNWVVTLL-----LIATGLTLLFAWLLTNS 208

Query: 273 VH----HLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSAL 328
           +     +   +A  IA G+LT+ I V G+DE   + + ++ +    ++ +     S + L
Sbjct: 209 ITKPIANALDAAEEIAKGNLTRPITVDGSDEAGRLLRAMSTMQEKLRDTLQRISGSATQL 268

Query: 329 ATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAA 388
           A+AAEE  +V  ++ + + +Q ++ +Q A A+++ T+ V EVA++A   +EAS+ A  +A
Sbjct: 269 ASAAEELNSVTDESARGLTQQNNEIEQAATAVNEMTSAVEEVARNAVSTSEASKNATTSA 328

Query: 389 MQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAA 448
             GR +V+E ++ IE +S D+Q   A +  LA +S DIG V+DVI+ +++QTNLLALNAA
Sbjct: 329 GDGRDLVQETVSAIERMSADVQSTAALIGNLADESRDIGKVLDVIRGLADQTNLLALNAA 388

Query: 449 IEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGAS 508
           IEAARAGE GRGFAVVADEVR LA RTQ+ST +I + +  +Q  +  + + +      A 
Sbjct: 389 IEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNSTERAE 448

Query: 509 KAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTAL 568
             +  AR AG +L  I   +  I+  N  IA+A+EEQ+ V  E+++N++ I ++S Q+A 
Sbjct: 449 STLNIARGAGMSLDTINTAIVEINERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSAT 508

Query: 569 GAQQSSEATLELARLAESMQQEVARYN 595
           GA Q+S A+ EL+RLA  +   V R++
Sbjct: 509 GANQTSAASAELSRLAVDLNNMVGRFS 535