Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  243 bits (619), Expect = 2e-68
 Identities = 173/548 (31%), Positives = 282/548 (51%), Gaps = 23/548 (4%)

Query: 53  VGLRLKLIVVLIVVSILFLGFKGLTGMQSASDSIESLYTKGMQHTIRAGRILDELGSARS 112
           + LR  L   ++ + +  LG   LT + +     E +  + +      G++  E    R+
Sbjct: 7   IALRAGLGFAVVALLVFLLGVFALTRIAAMEGDAEKVDQRLLPTIQLLGQVNQEFLMIRA 66

Query: 113 QLLLAFQHDPSSKYALMHDHPITMHVEGIQTSLTNLHRIVDNEILATVLDVQEKAVIQTL 172
             L     +P+ +            ++G++ +L    + +D      + D + KA++   
Sbjct: 67  STLRLLISEPAERSRGAET------LDGLRKTLAQERQDLDR----LIQDTEGKALLANF 116

Query: 173 KEKL---DQVTRQGFEPALQQLKAEKYDAANLILLQVINPLYNEIKKAAEAFLDI--QTQ 227
            + L   +   R+  E ALQ    E  +            L    +  ++A  D+    +
Sbjct: 117 DQSLARYESFQRRIVELALQNRMEEAIEITR-------GELNEHARSTSKAVYDLIGLNR 169

Query: 228 EGKNNFSASQHEINQFIWM-VSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG 286
              N  SA   E+    +  V +    A I T  LA+L+ + +   +      A  IA G
Sbjct: 170 NAANAASAHALEVAASAFQGVVVAMILAFIATIILAMLLTRSIVQPLAEAVGVAEVIAGG 229

Query: 287 DLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNI 346
           DLT+   V G+DE + +   +  +  S +E I     S + LA+AAEE   V   + + +
Sbjct: 230 DLTRHFQVVGSDEPARLLSALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDSTRGL 289

Query: 347 VEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLS 406
            +Q  + +Q A A+++ TA V EVA++A   +EAS E+++ A  GR+ V   +  I  L+
Sbjct: 290 HQQNHEIEQAATAVNEMTAAVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSIGLLA 349

Query: 407 NDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVAD 466
           +D+ +    ++ LA    DI  V+DVI+SI+EQTNLLALNAAIEAARAG+ GRGFAVVAD
Sbjct: 350 DDVTQTATEVERLAGQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVAD 409

Query: 467 EVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITA 526
           EVR LA RTQ+ST++I Q +  + Q +  + + ++     A   +E AR AG AL  I +
Sbjct: 410 EVRALAHRTQQSTQEIEQMIGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALDGIAS 469

Query: 527 NVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAES 586
            + +IS  N  IA+ASEEQ+ V  E+++N++ I ++S Q++ GA Q+S A+ ELARLA  
Sbjct: 470 AISQISERNLVIASASEEQAQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELARLAID 529

Query: 587 MQQEVARY 594
           +   VAR+
Sbjct: 530 LNNLVARF 537