Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  251 bits (641), Expect = 5e-71
 Identities = 154/395 (38%), Positives = 240/395 (60%), Gaps = 9/395 (2%)

Query: 206 VINPLYNEIKKAAEAF---LDIQTQEGKNNF--SASQHEINQFIWMVSLLGAFALIVTTS 260
           V+N LY  I   +E F   + +Q  E K  +  + + +E N+ + +  LL   AL++   
Sbjct: 146 VVNDLYPLIDPISEGFSELIHLQLGEAKAEYDEALALYERNRVLNIGLLL---ALLIGGG 202

Query: 261 L-ALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVIS 319
           L A+++ + ++  +  L  +A  +AAGDL++ I   G DE +++ + + ++  + ++ + 
Sbjct: 203 LFAMVLLRSISRPLEELKQAAASVAAGDLSRTIACRGKDEITEVQQSIRQMQQTLRDTLQ 262

Query: 320 SNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAE 379
             + S + LA+AAEE  AV   T Q I +Q  + Q  A A+ + +A V EVA +A   ++
Sbjct: 263 DIQGSATQLASAAEELHAVTQHTAQGIHQQNEEVQMAATAVTEMSAAVDEVAGNANRTSD 322

Query: 380 ASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQ 439
           AS +AE  A  GR+ V      I+ LS  LQ+    +  LA+++  IG VVDVI++I++Q
Sbjct: 323 ASRDAETVADDGRRQVTATRQTIDQLSEKLQQTAGTVTRLAEEAASIGQVVDVIRAIADQ 382

Query: 440 TNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANL 499
           TNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST++I + +  +Q ++  S   
Sbjct: 383 TNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQSSTQEIERMIGAIQSATEQSVRD 442

Query: 500 IEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITI 559
           ++Q    A+++   A  A  AL  I   V +I+ MN  IA+A+EEQ+ V  E+++N++ I
Sbjct: 443 MQQSSEFATRSQTMAGEADQALGLIAERVGQINEMNLVIASAAEEQAQVAREVDRNLVAI 502

Query: 560 SEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
            +IS Q+A GAQQ+S A+ ELARLA  + Q V R+
Sbjct: 503 RDISEQSATGAQQTSVASDELARLATHLNQLVGRF 537