Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  271 bits (694), Expect = 5e-77
 Identities = 157/381 (41%), Positives = 240/381 (62%), Gaps = 7/381 (1%)

Query: 214 IKKAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAV 273
           I K  E    +Q Q GK + + ++      + +V LLG  A       A++I +++   +
Sbjct: 265 IVKLGEELYGLQMQMGKEDTAHARSLQIGCVVLVMLLGILA-------AVIITRQITRPL 317

Query: 274 HHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAE 333
               +    IA+GDLT    VT  DE   + + + R+ T+ +E+IS  R  V+ +A+AAE
Sbjct: 318 RDTLAIVERIASGDLTHTEAVTRRDELGVLQQGIQRMGTTLRELISGIRDGVTQIASAAE 377

Query: 334 ENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRK 393
           E +AV  QT   +  Q+ +T Q+A A+H+ +ATVHEVA++A  A+ A+ +A+Q A  G K
Sbjct: 378 ELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVHEVARNAEQASVAASDADQQARDGDK 437

Query: 394 VVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAAR 453
           VV E I  IE L+ ++ +   AM +L +DS+ IG V+DVI++++EQTNLLALNAAIEAAR
Sbjct: 438 VVGEAIQQIERLAAEVVRSSDAMNVLEQDSDKIGKVMDVIKAVAEQTNLLALNAAIEAAR 497

Query: 454 AGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEK 513
           AGE GRGFAVVADEVR LA RTQ+ST++I   V  LQ  +R  + ++    +    +VE 
Sbjct: 498 AGEAGRGFAVVADEVRGLAQRTQQSTEEIEGLVAALQNGTRQVSGIMLGSRTLTDSSVEL 557

Query: 514 ARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQS 573
            R AGT+L  IT  V  I  MN QIA A+E+QS+V +EI+++I+ + ++S QTA  ++++
Sbjct: 558 TRRAGTSLESITRTVSSIQAMNQQIAAAAEQQSSVADEISRSIVNVRDVSEQTAEASEET 617

Query: 574 SEATLELARLAESMQQEVARY 594
           + +++ELARL   +Q  V+ +
Sbjct: 618 AASSVELARLGGQLQMMVSHF 638