Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  239 bits (610), Expect = 2e-67
 Identities = 153/439 (34%), Positives = 246/439 (56%), Gaps = 25/439 (5%)

Query: 163 VQEKAVIQTLKEKLDQVTRQGFEPALQQL----KAEKYDAANLILLQVIN---PLYNEIK 215
           VQ     + L+++L  +TR      LQ L         D  N++L ++++      NE+K
Sbjct: 119 VQLLGQYRQLEDRLKTLTRANNIDELQGLLNNEMVSNSDQMNVVLRKLVDINTAQLNEVK 178

Query: 216 KAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHH 275
           + A    D                 + F  ++ LL A A ++T   A ++ K +   +  
Sbjct: 179 EQASIEYD-----------------SAFNMVIGLLIA-ATLLTLVFAWMLIKSITTPIAT 220

Query: 276 LASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEEN 335
              +A  IA G+LT+ I + G DE   +   +  +    ++ +     S + LA+AAEE 
Sbjct: 221 ALLAAETIAQGNLTRPISIDGTDEAGRLLLAMKTMQDKLRDTLQGISGSATQLASAAEEL 280

Query: 336 AAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVV 395
            AV  ++ + +V+Q  + +Q A A++Q T+ V EVA++A   ++AS  A  +A  GR +V
Sbjct: 281 NAVTDESARGLVQQNDEIEQAATAVNQMTSAVEEVARNATSTSQASRSAATSAGDGRDLV 340

Query: 396 EENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAG 455
           +E ++ IE +S D+Q     +  LA +S DIG V+DVI+ +++QTNLLALNAAIEAARAG
Sbjct: 341 QETVSAIERMSGDVQGTAELIISLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAG 400

Query: 456 EQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKAR 515
           E GRGFAVVADEVR LA RTQ+ST +I + +  +Q  +  + + +      A   +  A+
Sbjct: 401 EAGRGFAVVADEVRALAHRTQQSTSEIERMISSIQTGTEQAVSSMRNSTERAESTLNIAK 460

Query: 516 LAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSE 575
            AG AL+ I + V+ I+  N  IA+A+EEQ+ V  E+++N++ I ++S Q+  GA Q+S 
Sbjct: 461 GAGQALNTINSAVEEINERNMVIASAAEEQAQVAREVDRNLVNIRDLSAQSTNGANQTSA 520

Query: 576 ATLELARLAESMQQEVARY 594
           A+ EL+RLA  +   VAR+
Sbjct: 521 ASTELSRLAIDLNGMVARF 539