Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  248 bits (633), Expect = 5e-70
 Identities = 158/437 (36%), Positives = 241/437 (55%), Gaps = 1/437 (0%)

Query: 158 ATVLDVQEKAVIQTLKEKLDQVTRQGFEPALQQLKAEKYDAANLILLQVINPLYNEIKKA 217
           AT L+  E+A    L+  L      G +  +  +KA  Y+AA   L  + +  + +++  
Sbjct: 133 ATPLEDDERAAGDQLELMLPAYI-SGSQQVVDLMKAGNYEAARTQLNSLSSESFTKVRSY 191

Query: 218 AEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLA 277
               +D   ++ K   +A+       + M+ +    A +V   L +LI + +   +    
Sbjct: 192 MRVMIDSNNRQIKEGAAAAADLKASSVLMLEIGVVIAFLVAIMLGVLITRMITRPLAVAV 251

Query: 278 SSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAA 337
           +SA  IA GDLTQ I  T  DE   +   ++ +    +  I     +   LA+AAEE +A
Sbjct: 252 ASAQRIAGGDLTQPIVSTSGDEAGQLLNALSDMQGGLKNTIQQIASASDQLASAAEELSA 311

Query: 338 VAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEE 397
           V  ++ + +  Q  + QQ A A++Q TA V EVA++A   +EAS+ A   A+ GR  V+ 
Sbjct: 312 VTDESTRGLTRQNDEIQQAATAVNQMTAAVEEVARNAVSTSEASKSATDDAVDGRGQVDH 371

Query: 398 NIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQ 457
            +  I  + +++     A+  LA    +I  V+DVI+SI+EQTNLLALNAAIEAARAGEQ
Sbjct: 372 TVKGITTMVHEITASTGAVSELAGHVREISKVLDVIRSIAEQTNLLALNAAIEAARAGEQ 431

Query: 458 GRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLA 517
           GRGFAVVADEVR LA RTQ ST +I   +  +Q  +  +   + + +S A+   E A  A
Sbjct: 432 GRGFAVVADEVRALAHRTQASTVEIEGMISTVQSGADGAVAAMGKSLSLATNTQELALRA 491

Query: 518 GTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEAT 577
           G AL +IT  V  I+  N  IA+ASEEQ+ V  E+++N+I I ++S Q+A GA Q+S ++
Sbjct: 492 GAALEKITLGVATINERNLVIASASEEQAQVAREVDRNLINIQDLSTQSAAGANQTSASS 551

Query: 578 LELARLAESMQQEVARY 594
            EL+RLA S    VA +
Sbjct: 552 QELSRLATSFNSLVANF 568