Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  240 bits (613), Expect = 1e-67
 Identities = 137/378 (36%), Positives = 226/378 (59%)

Query: 212 NEIKKAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNN 271
           ++++   +  + +   + +   +A+     Q +WMV +     +I T  LA +  + +  
Sbjct: 158 DQVETGLKKLIGVNDAKAEKAGAAANAAYQQTLWMVGIFITVGVITTLLLAWMYTRSLTG 217

Query: 272 AVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATA 331
            +    S A  IA  DL+Q IP  G DE + +   +  + ++ +  ++    S + LA  
Sbjct: 218 PIGDSLSIAQRIATNDLSQDIPQHGTDEAAKLIAALATMQSNLRNALTLIGDSSTQLAAT 277

Query: 332 AEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQG 391
           +EE  AV     + I+ Q ++ +  A A+++ +A V EVA +A  A+E + ++  AAM G
Sbjct: 278 SEEMHAVTEDASRTILRQTNEIEMAATAVNEMSAAVEEVASNAASASEVTSQSSTAAMAG 337

Query: 392 RKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEA 451
           R  V+E +  I  + + +Q     +Q LA  + DI  V+DVI++I+EQTNLLALNAAIEA
Sbjct: 338 RAQVDETVTAINLMVSKVQITSTEVQGLAVMATDISKVLDVIRAIAEQTNLLALNAAIEA 397

Query: 452 ARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAV 511
           ARAGE GRGFAVVADEVR LA RTQ+ST++I Q V  +Q  + ++ + +EQ    A K +
Sbjct: 398 ARAGEAGRGFAVVADEVRALAHRTQQSTREIEQMVDSIQTGTGNAVSAMEQTSVQAHKTL 457

Query: 512 EKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQ 571
           E A  AG AL +IT ++ +I+  N  IATA+EEQ+ V  E+++++++I ++S+QT+ G+ 
Sbjct: 458 EMANGAGKALLEITESISQINERNLMIATAAEEQAQVAREVDRSLVSIRDLSSQTSEGSN 517

Query: 572 QSSEATLELARLAESMQQ 589
           Q++ AT EL+ LA S+ +
Sbjct: 518 QTAIATAELSTLASSLNR 535



 Score = 37.0 bits (84), Expect = 2e-06
 Identities = 67/298 (22%), Positives = 124/298 (41%), Gaps = 42/298 (14%)

Query: 189 QQLKAEKYDAANLILLQVINPLYNEIKKAAEAFLDIQT--QEGKNNFSASQHEINQFIWM 246
           +++ A   DA+  IL Q      NEI+ AA A  ++    +E  +N +AS  E+      
Sbjct: 279 EEMHAVTEDASRTILRQT-----NEIEMAATAVNEMSAAVEEVASN-AASASEVTSQSST 332

Query: 247 VSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKY 306
            ++ G   +  T +   L+  +V      +   A  + A D+++ +     D    IA+ 
Sbjct: 333 AAMAGRAQVDETVTAINLMVSKVQITSTEVQGLA--VMATDISKVL-----DVIRAIAEQ 385

Query: 307 VNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTAT 366
            N +  +     +    +    A  A+E  A+A +T+Q+  E +     I       T T
Sbjct: 386 TNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTREIEQMVDSIQ------TGT 439

Query: 367 VHEVAQSAGLAAEASEEAEQAAMQGRKVVE--ENIAMIEGLSNDLQKMLA-AMQLLAKDS 423
            + V+     + +A +  E A   G+ ++E  E+I+ I    N+   M+A A +  A+ +
Sbjct: 440 GNAVSAMEQTSVQAHKTLEMANGAGKALLEITESISQI----NERNLMIATAAEEQAQVA 495

Query: 424 EDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQ 481
            ++   +  I+ +S QT+              E     A+   E+ TLAS     TKQ
Sbjct: 496 REVDRSLVSIRDLSSQTS--------------EGSNQTAIATAELSTLASSLNRLTKQ 539