Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  255 bits (652), Expect = 3e-72
 Identities = 149/382 (39%), Positives = 232/382 (60%), Gaps = 7/382 (1%)

Query: 213 EIKKAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNA 272
           +I  +AE  +  Q         ++  ++     +V LLG FA       A+LI +++   
Sbjct: 266 DIVTSAEKLMAGQVVSANKEKDSAVTQLLTVAVIVLLLGIFA-------AILITRQITRP 318

Query: 273 VHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAA 332
           +     +A  IA GDLT  +  T  DE   +   +  +  S + +I    + V+ +ATAA
Sbjct: 319 LDSTVIAARRIADGDLTNDLSTTRQDELGLLQNTMQHMTVSLRTLIGGISNGVTQIATAA 378

Query: 333 EENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGR 392
           EE +AV+ QT   + +Q+ +  Q+A A++Q  +TV EVAQ+   A++A+ +A   A  G 
Sbjct: 379 EELSAVSEQTSAGVTQQKLEVDQVATAMNQMASTVQEVAQNTEDASQAARQASDRAAHGS 438

Query: 393 KVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAA 452
            VV+     I  L+ ++ ++  AMQ L +DS+ IG V+DVI++++EQTNLLALNAAIEAA
Sbjct: 439 SVVQHATREISQLAGEVGQLGEAMQRLIQDSDKIGGVIDVIKAVAEQTNLLALNAAIEAA 498

Query: 453 RAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVE 512
           RAGEQGRGFAVVADEVR+LA RTQ ST +I   ++ LQ  +  ++ L+          V 
Sbjct: 499 RAGEQGRGFAVVADEVRSLAQRTQSSTTEIEALIKSLQDGTGAASELMNASRQRTEGTVA 558

Query: 513 KARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQ 572
            AR A  +L +IT ++  I  M+ QI+ A+EEQSAVT+EIN+++I++ +I++Q+A   +Q
Sbjct: 559 LARQAEESLLEITHSIVTIEQMSQQISAAAEEQSAVTDEINRSVISVRDIADQSATATEQ 618

Query: 573 SSEATLELARLAESMQQEVARY 594
           S+ +T+ELARL  ++Q  VAR+
Sbjct: 619 SAASTVELARLGSNLQDMVARF 640