Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  248 bits (632), Expect = 7e-70
 Identities = 140/340 (41%), Positives = 211/340 (62%)

Query: 255 LIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSF 314
           LIV   LA +I + +  AV  +  +   ++  DLT R    G DEF +I++ ++ +    
Sbjct: 311 LIVVLWLASVIIRNIKVAVVDVNRTLMALSTRDLTARTRYIGKDEFGEISRNLDNMAHQI 370

Query: 315 QEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSA 374
            EVIS    + + +ATAAE+++AVA+QT QN+ +Q+  T Q+A AI + +ATV +VA+S 
Sbjct: 371 SEVISEIGSATAQVATAAEQSSAVALQTNQNVAQQRQGTDQVATAISEMSATVKDVARST 430

Query: 375 GLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQ 434
             AAE S+    + +QG+  ++  I +I+ LS   ++    +  L  +S  I SV+DVI+
Sbjct: 431 TDAAEMSQRVNSSTVQGKTEIDNTIGLIQELSVQAEETSRIIDELKGESNSISSVLDVIR 490

Query: 435 SISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSR 494
            +++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ+ST  I + +  LQ  S 
Sbjct: 491 GVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKKTQDSTVSIQKMIANLQSGSE 550

Query: 495 DSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINK 554
            +A  +++ +  A +       AG  L +I   +  IS  N Q+A+A+EEQS V EEI++
Sbjct: 551 RAAASMQETLGKAQEGASNVVRAGELLEEIAEGIATISDRNIQVASAAEEQSLVAEEIHR 610

Query: 555 NIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
           N+  I+ +  Q + GA+Q++  + ELARLAE  Q  V R+
Sbjct: 611 NVDDINSLVIQVSAGAEQTAVTSRELARLAEQQQGLVGRF 650



 Score = 38.1 bits (87), Expect = 1e-06
 Identities = 23/91 (25%), Positives = 42/91 (46%)

Query: 506 GASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQ 565
           G  +  E +R       QI+  +  I +   Q+ATA+E+ SAV  + N+N+    + ++Q
Sbjct: 352 GKDEFGEISRNLDNMAHQISEVISEIGSATAQVATAAEQSSAVALQTNQNVAQQRQGTDQ 411

Query: 566 TALGAQQSSEATLELARLAESMQQEVARYNA 596
            A    + S    ++AR      +   R N+
Sbjct: 412 VATAISEMSATVKDVARSTTDAAEMSQRVNS 442