Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  253 bits (647), Expect = 1e-71
 Identities = 156/436 (35%), Positives = 254/436 (58%), Gaps = 15/436 (3%)

Query: 167 AVIQTLKEKLDQVTRQGFEPALQQLKAEKYDAANLI-LLQVINPLYNEIKKA-------A 218
           A +   + +L        + AL  LK  K    ++  +LQ    + N++++        A
Sbjct: 251 AQVDAARSQLPVEANAAVDAALVALKQYKVLMTSISDMLQQTEQIRNDLQQQSVATAARA 310

Query: 219 EAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLAS 278
           +    +Q    K     +  ++     +V L+G FA       A LI +++   ++    
Sbjct: 311 DDLAALQVISAKKEQQTAVVQLLSVALVVLLVGIFA-------AFLITRQITVPLNSTVI 363

Query: 279 SATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAV 338
           +A  IA GDLT     T  DE   +   +  +  S + +I    + V+ +ATAAE+ +AV
Sbjct: 364 AARRIADGDLTHDSSTTRQDELGLLQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAV 423

Query: 339 AMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEEN 398
           + QT   +  Q+++  Q+A A+++  +TV EVA++   A++A+++A + A  G  VV+  
Sbjct: 424 SEQTSAGVTLQKNEVDQVATAMNEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHA 483

Query: 399 IAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQG 458
              I  L+ ++Q++  AMQ L +DS  IGSV+DVI++++EQTNLLALNAAIEAARAGEQG
Sbjct: 484 TREIGQLAGEVQQLGEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQG 543

Query: 459 RGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAG 518
           RGFAVVADEVR+LA RTQ ST +I   +Q LQ+ +  ++ L++  +      V  AR A 
Sbjct: 544 RGFAVVADEVRSLAQRTQNSTTEIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAE 603

Query: 519 TALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATL 578
            AL +I  ++  I  M+ QI+ A+E+QSAVTEEIN++++++ +I++Q+A   +QS+ +T+
Sbjct: 604 QALVEINQSIGTIEQMSQQISAAAEQQSAVTEEINRSVLSVRDIADQSASATEQSAASTV 663

Query: 579 ELARLAESMQQEVARY 594
           ELARL   +Q  VAR+
Sbjct: 664 ELARLGSDLQSMVARF 679